- Clone 'cicl009c24' >
- Transcript 'Phmamm.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S2.g00070.01.t
Possible name(s)
DDX27; DDX47; DDX56
Gene model
Location
S2 [199,365 / 204,453]
Amino acid sequence
Length: 527
>Phmamm.CG.MTP2014.S2.g00070.01.p
MEDDEVPKKVQFHEMGLDNRILKSIANLGWSEPTAIQEKAIPFALDGKDILSRARTGSGK
TAAYAIPIIQRILNNKKSTASDEGQQIRALVLVPSRELSKQAYVMMQELISCCSQSVSCI
DVSHESNPELLRPLLSEKPDVVIGTPSRVLAQVNAENLDLSTLQWLVMDEADLLFSFGYE
DDLRSLNPHFPNNYQAFITSATFTEDVEALKKLILHNPITLNLNESQLPAASQLTQYHVF
NETEDDKYLLIYALLKLKLIRGKSLLFVNTVNRCYRLKLFLEQFSIFCCVLNSELPVNIR
CHVVEQYNQGLYDIIIATDESSLIDLPANETTNKPTNKMGKMKKKRKVQSKEYCVSRGID
FQNVSNVINFDFPKTVQAYVHRVGRTARGDKMGTALSFVLAEEMDLLKEAQKQLSGSGEE
EDTPLKPYQFKMEEIEGFRYRCKDAIRSVTKTRIREARVKEIRREMLNSEKLKTYFEENP
NDLHVLRHDAVSQPVKVKKHMKNVPEYLINLDLLGPNSLPGFGKSLE
Nucleotide sequence
Length: 1,585
>Phmamm.CG.MTP2014.S2.g00070.01.t
TATGGAAGACGATGAAGTACCTAAAAAAGTTCAGTTTCATGAAATGGGATTGGACAATAG
AATATTGAAGTCTATTGCAAATCTTGGTTGGTCCGAGCCGACAGCAATTCAAGAAAAAGC
AATTCCCTTTGCTTTGGATGGCAAGGACATATTATCAAGAGCAAGAACTGGATCAGGAAA
AACTGCTGCATATGCTATTCCTATCATACAGCGGATCTTGAACAACAAAAAGTCCACTGC
CTCTGATGAAGGTCAACAAATAAGGGCATTGGTTCTTGTTCCATCAAGGGAGTTATCGAA
GCAAGCATATGTGATGATGCAAGAACTAATATCATGTTGTTCACAAAGTGTTTCTTGCAT
TGATGTTTCACATGAATCCAATCCAGAATTACTCAGGCCCTTACTGTCAGAAAAACCTGA
CGTTGTTATTGGCACACCTAGTCGAGTGCTTGCCCAAGTTAATGCAGAAAACCTTGACCT
TTCAACCCTACAGTGGCTTGTTATGGATGAAGCTGATTTATTATTTTCATTCGGATATGA
GGATGACCTGAGATCTTTAAATCCCCATTTTCCAAACAATTACCAAGCTTTTATTACCTC
TGCAACATTTACTGAGGATGTAGAAGCATTAAAGAAACTGATTCTTCACAATCCAATCAC
ACTTAACCTAAATGAATCCCAATTGCCAGCAGCAAGCCAATTGACACAATATCATGTTTT
CAATGAAACAGAGGATGACAAATACTTGCTGATTTATGCACTGCTTAAACTCAAACTTAT
TCGTGGAAAGTCGCTGCTGTTTGTAAACACAGTTAACAGATGTTACAGATTAAAGTTGTT
TCTTGAGCAGTTTTCGATTTTCTGCTGCGTTCTAAACTCTGAGTTACCTGTGAATATAAG
ATGCCATGTTGTGGAACAATATAACCAAGGTCTTTATGACATAATTATTGCAACAGATGA
AAGCTCCCTTATTGATTTACCTGCCAATGAAACTACAAACAAACCTACAAATAAGATGGG
AAAAATGAAGAAAAAAAGGAAAGTTCAATCCAAGGAGTACTGTGTTTCAAGAGGCATTGA
CTTTCAAAATGTATCTAATGTAATCAACTTTGACTTTCCCAAAACTGTTCAAGCTTATGT
TCACCGAGTTGGAAGGACTGCAAGGGGTGATAAAATGGGCACTGCATTGTCGTTTGTGCT
TGCTGAAGAAATGGATTTACTCAAAGAAGCACAGAAACAACTATCAGGAAGTGGGGAAGA
GGAAGACACCCCACTAAAACCTTATCAATTCAAAATGGAGGAGATTGAAGGATTTCGATA
TCGTTGCAAGGATGCAATTCGGTCAGTGACAAAAACAAGAATACGGGAAGCCAGAGTAAA
AGAAATCCGCAGAGAAATGTTGAACTCGGAAAAACTGAAGACCTACTTTGAAGAGAATCC
CAATGACTTGCACGTATTGCGACATGATGCAGTTTCACAGCCTGTCAAAGTGAAAAAACA
CATGAAGAATGTTCCAGAGTATCTCATTAATCTGGACCTGCTTGGACCAAACAGTTTGCC
TGGATTTGGCAAAAGCCTGGAATAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[6-222] 1.44E-51 - T[26-414] 1.13E-31 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[10-38] 10.609 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[29-237] 2.8E-41 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[34-209] 7.4E-37 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[41-221] 24.197 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[233-436] 13.482 |
| CDD |
Helicase_C (IPR001650) - T[238-398] 1.95072E-21 |
| Pfam |
Helicase_C (IPR001650) - T[246-389] 8.3E-32 |
| SMART |
Helicase_C (IPR001650) - T[275-390] 3.5E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 29.484 % | 186 | 7.97E-51 |
| DDX47_HUMAN | 29.736 % | 192 | 2.7E-55 |
| DDX56_HUMAN | 56.202 % | 555 | 0 |