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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S365...' > 
  2. Transcript 'KH2012:KH.C12.624.v1...' > 
  3. Transcript 'KH2012:KH.C9.9.v2.A....' > 
  4. Transcript 'Moocul.CG.ELv1_2.S77...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3011.g17356.01.t

Possible name(s)

NLRC3; NLRP8; NOD2

Gene model

Phmamm.CG.MTP2014.S3011.g17356

Location

S3011 [2,127 / 4,096]

Sequences

Amino acid sequence

Length: 170

>Phmamm.CG.MTP2014.S3011.g17356.01.p
MKVELDISYNNVGDIGACAITKSIHKMKKLEMDNCEITCKGMPDITQNILNSQTKIPYLD
LSENKFGDDGAQELGKCLHLVEELHLRDCDITSTGANALAGGLSKLQTPMHKLDLSGNPV
GDLGAAAISKCLSNVKSLGLSGGLFWYTGITSEGVSHIASGLLSLQEPVR

Nucleotide sequence

Length: 513

>Phmamm.CG.MTP2014.S3011.g17356.01.t
ATGAAGGTTGAATTAGACATCAGCTACAATAATGTGGGTGACATTGGAGCTTGTGCAATT
ACCAAGTCAATCCACAAAATGAAAAAGCTTGAAATGGATAACTGTGAAATCACATGTAAA
GGAATGCCAGACATCACTCAAAACATCCTAAACTCTCAAACTAAGATTCCCTACTTGGAT
TTGTCAGAGAATAAGTTTGGTGATGATGGGGCCCAGGAACTTGGAAAATGTTTGCATCTG
GTGGAGGAACTTCACTTGCGTGATTGTGACATCACTTCCACTGGTGCAAATGCATTGGCT
GGTGGATTATCCAAGTTACAGACACCAATGCATAAACTTGACCTAAGTGGCAACCCAGTT
GGTGACCTTGGTGCTGCAGCAATATCAAAATGTCTGAGCAATGTCAAGTCACTTGGTTTG
AGTGGTGGTTTATTTTGGTATACTGGAATAACATCAGAAGGAGTTTCTCATATCGCTTCA
GGTTTGCTGTCACTCCAAGAACCGGTGAGATGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[3-168] 8.2E-33
Pfam
Leu-rich_rpt (IPR001611) - T[4-17] 0.12 - T[58-74] 0.0064 - T[81-100] 0.023 - T[110-129] 0.0069

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value