Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3087.g17446.01.t

Possible name(s)

CTRB1; CTRB2; CTRL

Gene model

Phmamm.CG.MTP2014.S3087.g17446

Location

S3087 [5,510 / 8,878]

Sequences

Amino acid sequence

Length: 244

>Phmamm.CG.MTP2014.S3087.g17446.01.p
MMYNCLLTWQDQFATSAGYPCFVVNQQASLQRSGSHFCGGSLIAPGYVMTAAHCEITTTT
VYVGLGGVYWQNLEQYIQQDQFTAHPQYNPNNFDYDYGIITLANNAALNDNVAVANLVAD
GKEYPAGTEATVTGWGYTKKTGQGGGVVPDILQEGAVPLISQSQCQSIWGANSIPITNRM
QCAGTGSTGSCNGDSGGPLVVLDGPQYILIGAVSWGSSSCNTNYPSGYAKLSAVRGWING
IAGV

Nucleotide sequence

Length: 735

>Phmamm.CG.MTP2014.S3087.g17446.01.t
ATGATGTATAACTGCTTATTGACTTGGCAGGACCAGTTTGCAACATCAGCTGGCTATCCA
TGTTTTGTTGTCAATCAACAGGCGTCACTTCAGCGCTCGGGATCCCATTTTTGCGGTGGC
TCGCTCATTGCTCCTGGCTACGTCATGACTGCAGCTCATTGCGAAATTACAACAACCACA
GTATATGTTGGACTTGGTGGAGTTTATTGGCAGAACTTGGAGCAATATATACAGCAGGAT
CAATTCACAGCCCACCCCCAATACAACCCAAACAATTTCGATTATGATTACGGAATAATA
ACACTTGCCAACAATGCCGCTTTGAACGACAATGTTGCAGTTGCGAATTTGGTTGCAGAC
GGTAAGGAATATCCTGCAGGTACTGAAGCCACTGTAACAGGATGGGGATATACCAAGAAA
ACCGGACAAGGGGGCGGTGTGGTGCCCGATATTCTCCAGGAAGGAGCTGTCCCGCTGATA
TCACAATCGCAATGTCAATCAATTTGGGGAGCAAATTCTATTCCGATTACCAATAGAATG
CAATGCGCGGGAACAGGGTCAACTGGCTCTTGCAACGGTGACTCCGGTGGACCACTTGTG
GTGCTTGATGGCCCGCAATACATTCTCATTGGTGCTGTTTCGTGGGGAAGCAGCTCTTGC
AACACCAATTATCCGTCGGGATACGCTAAACTTTCTGCTGTTCGTGGTTGGATTAATGGC
ATTGCGGGTGTGTAA

InterProScan

SMART	Trypsin_dom (IPR001254) - T[22-238] 1.1E-59
ProSiteProfiles	Trypsin_dom (IPR001254) - T[27-243] 26.108
CDD	Trypsin_dom (IPR001254) - T[27-241] 1.85715E-71
SUPERFAMILY	Peptidase_S1_PA (IPR009003) - T[27-241] 4.52E-60
Pfam	Trypsin_dom (IPR001254) - T[27-238] 2.2E-50
PRINTS	Peptidase_S1A (IPR001314) - T[39-54] 3.7E-11 - T[92-106] 3.7E-11 - T[188-200] 3.7E-11
ProSitePatterns	TRYPSIN_HIS (IPR018114) - T[49-54] .
ProSitePatterns	TRYPSIN_SER (IPR033116) - T[189-200] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CTRL_HUMAN	37.9 %	140	9.42E-41
CTRB2_HUMAN	37.727 %	145	8.5E-43
CTRB1_HUMAN	37.727 %	145	1.29E-42