Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3098.g17456.01.t

Possible name(s)

NLRC3; NLRP2; NLRP3

Gene model

Phmamm.CG.MTP2014.S3098.g17456

Location

S3098 [292 / 2,766]

Sequences

Amino acid sequence

Length: 221

>Phmamm.CG.MTP2014.S3098.g17456.01.p
MLTSLNLDDNIVNDESASAIADCIHNLKQLSLRNCQMSNKGLCQVARSVLQLPQPLTLLN
IDDNIVNDESASAIAECICNTNQLSLRNCQMSNNGLCQIARAVSQLPQPMESIFLKGNNV
GDQCAKYIADCLFNIRKYEASFQSIDLPKAAKKIVQPTVLKLKDRDNYELIKTKSWVVDS
EGARLEVGGCIVEIPPNALDQPTNITLTSYYGKQSSVNVKH

Nucleotide sequence

Length: 666

>Phmamm.CG.MTP2014.S3098.g17456.01.t
ATGCTCACATCACTCAATCTTGATGACAACATTGTCAATGATGAAAGTGCATCTGCAATA
GCTGATTGTATTCACAATCTGAAACAGCTTTCTCTGAGAAATTGTCAAATGTCAAACAAA
GGTTTATGTCAAGTTGCAAGATCTGTATTACAACTTCCACAACCACTCACATTACTCAAT
ATTGATGACAACATTGTCAATGATGAAAGTGCATCTGCAATAGCTGAGTGTATTTGCAAT
ACCAATCAACTTTCTCTGAGAAATTGTCAAATGTCAAACAATGGTTTGTGTCAAATTGCA
AGAGCTGTATCACAACTTCCACAACCAATGGAGAGTATATTTTTGAAAGGGAATAATGTT
GGCGACCAGTGTGCAAAATACATTGCTGATTGCTTGTTCAATATTCGAAAATATGAGGCC
AGTTTTCAGTCCATAGATTTGCCTAAAGCTGCAAAGAAAATTGTTCAGCCAACTGTCTTG
AAGCTTAAAGATCGTGATAATTATGAGTTGATCAAGACCAAATCTTGGGTTGTGGATTCA
GAAGGAGCTAGACTTGAAGTTGGAGGATGTATTGTTGAAATTCCACCAAACGCTTTGGAT
CAACCAACAAATATCACACTTACTTCTTATTATGGAAAGCAGTCTTCTGTGAATGTAAAA
CATTAG

InterProScan

Gene3D	LRR_dom_sf (IPR032675) - T[1-170] 1.2E-23
Pfam	Leu-rich_rpt (IPR001611) - T[2-21] 0.24 - T[25-42] 1.7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value