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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S314.g07117.01.t

Possible name(s)

NLRC3; NLRP13

Location

S314 [39,722 / 49,436]

Sequences

Amino acid sequence

Length: 636

>Phmamm.CG.MTP2014.S314.g07117.01.p
MSSSLQSKMEYPTRLHLLRQQAKISFIAQAHGVSILNSRCEMDAGEICREICGENWEKVY
GYLEEHPVLLEACDDEYMRRIIIYVIFKNPESDFRTETEILTTMMTMFAKEKDDVFDFEG
TARLAWNQTCAQSESDPLHRNLPMFMSTFNDKTANFQFDILKHSFTHSVWKFYFAAFYAA
VFMSKQQLDDFVEQLHSEVLRYLFGFLNPKIQRQLHSLLKTEILAERTEMLKTLLCNFVK
SFTSNNNEMMYTWVYEAQNDQIAEVIAGGLPESIEVGTNASSCKIVVPASAMAGLTTLAC
QSTTTHGLHFSHVNLMKQLAFEFITIGDDGAEALASCIHNIDKLHLWSCKITSVGTRALS
SAIEKLSKPMKKLCLMWNQIGNDGARHLATCIHDIDELDVTECGITDDGIDKLSSAVIKR
PLPNKYNLVDTKSSVVSSDGAKLEISGCTLDLPHDALNQPTTVNMTSCYGKEGEKDHLSP
MLQLEPHGLELNKPVPVTVSICAEVENQEDVEVMISTDNSTWETFKTRIIYGTLSLTFYI
TRFARQVLMRYNILSAKFYFAIGDLPSTDEELQQVPDTSRDVSGTSRDVPGTSKDVPGTS
RDEPDSPKSNHILEYIINADYRKKNFLQKVEEEKKR

Nucleotide sequence

Length: 1,911

>Phmamm.CG.MTP2014.S314.g07117.01.t
ATGTCCTCCTCTCTTCAGTCGAAAATGGAGTACCCAACACGTCTCCATCTTCTCCGACAG
CAGGCAAAAATCTCCTTCATCGCTCAAGCACATGGCGTGAGCATTCTCAACAGCAGATGT
GAAATGGACGCGGGAGAAATTTGTCGTGAAATTTGCGGCGAAAACTGGGAGAAAGTTTAC
GGGTATTTAGAAGAACATCCAGTTTTACTTGAAGCTTGTGATGACGAGTACATGCGCAGA
ATCATTATTTATGTAATTTTTAAAAACCCAGAGAGTGATTTCAGGACAGAGACAGAAATA
TTAACAACAATGATGACCATGTTTGCAAAGGAGAAAGATGACGTTTTTGACTTTGAAGGA
ACTGCACGTTTAGCATGGAACCAAACATGCGCGCAGTCCGAGTCTGATCCTCTACATAGG
AATTTGCCAATGTTTATGTCAACGTTTAATGACAAGACAGCAAACTTTCAGTTTGATATA
TTGAAACATTCTTTTACTCATAGCGTCTGGAAATTTTATTTCGCAGCATTTTATGCTGCA
GTTTTTATGTCAAAACAACAACTAGACGATTTCGTAGAACAACTTCATTCTGAAGTCCTC
CGATATTTGTTCGGTTTTCTTAATCCAAAAATTCAACGGCAACTTCATAGTCTACTCAAG
ACTGAAATCTTGGCCGAAAGAACTGAGATGTTGAAAACTCTGCTTTGTAATTTCGTCAAA
TCTTTTACATCCAACAACAATGAAATGATGTATACATGGGTGTACGAAGCGCAAAACGAC
CAAATTGCTGAAGTAATAGCCGGTGGGTTGCCAGAGAGCATTGAAGTTGGTACAAACGCA
TCAAGTTGCAAAATTGTCGTCCCGGCATCAGCGATGGCAGGTTTGACGACCTTGGCTTGT
CAGTCAACAACAACTCATGGCTTACATTTCTCGCACGTTAATCTGATGAAACAATTAGCG
TTCGAGTTTATTACAATCGGTGATGATGGAGCAGAAGCATTAGCATCTTGCATACATAAT
ATTGACAAACTTCATTTGTGGTCGTGTAAAATTACCAGTGTTGGTACAAGAGCATTGTCA
TCAGCAATCGAAAAACTGTCAAAGCCGATGAAAAAATTGTGTCTCATGTGGAATCAAATA
GGAAACGACGGAGCGAGACATTTAGCTACCTGCATTCATGATATTGATGAACTCGATGTA
ACAGAATGTGGAATTACAGATGATGGAATAGACAAGTTGTCATCTGCCGTTATCAAAAGG
CCATTACCAAACAAATACAACTTGGTCGACACTAAGTCATCAGTTGTTTCATCCGATGGA
GCTAAACTTGAAATTAGTGGATGTACTCTTGACTTGCCACACGACGCATTGAACCAACCG
ACAACAGTCAATATGACCTCTTGCTATGGTAAAGAGGGCGAAAAGGACCATCTGAGTCCA
ATGCTTCAATTAGAACCACATGGCTTAGAATTAAATAAACCTGTTCCTGTCACTGTCTCA
ATCTGCGCCGAAGTAGAAAATCAAGAAGATGTTGAAGTGATGATAAGCACGGATAATTCA
ACATGGGAAACCTTCAAAACCCGTATTATCTACGGCACTTTGAGTCTCACTTTTTACATC
ACTCGATTTGCCAGGCAAGTTTTGATGCGTTATAACATTCTATCTGCTAAGTTCTATTTT
GCAATAGGTGACTTGCCATCAACAGACGAAGAGTTGCAGCAGGTTCCTGACACATCGAGG
GATGTATCTGGAACATCAAGAGACGTACCTGGAACATCAAAAGACGTACCTGGAACATCA
AGAGATGAACCTGACTCACCAAAGTCTAATCACATATTAGAGTATATTATCAATGCAGAT
TACCGCAAGAAAAATTTCCTTCAAAAAGTAGAAGAGGAAAAGAAGCGTTGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[272-432] 2.1E-16
Pfam
Leu-rich_rpt (IPR001611) - T[370-389] 0.17 - T[397-414] 0.29
Pfam
ZU5_dom (IPR000906) - T[433-517] 3.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value