- Transcript 'Moocci.CG.ELv1_2.S53...' >
- Transcript 'KH2012:KH.L7.16.v1.A...' >
- Transcript 'KH2012:KH.C3.99.v1.A...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S316.g07151.01.t
Possible name(s)
SRBD1; SUPT6H; TMPRSS13
Gene model
Location
S316 [120,461 / 150,736]
Amino acid sequence
Length: 1,898
>Phmamm.CG.MTP2014.S316.g07151.01.p
MADYMDYEAEESSDEEYDVKRGRTVLDSEDEEENEKEESSDEEYDVKRGRTVLDSEDEEE
NEKALAKEIDDTGNISGLVDDNVVDDEEEADDDNDSFDSTEDEDQDSDAENVEKKHKKRK
RDHRLEDDDFDLIEENLGVKLKKRKKFSRLRTVSSDEDEEDAEQDEKEVIQDQLFYGPAD
DDVAQAPHPEPEMPLIGDAEEEELSDESDVDDFIVDDNGEPISKPQKGMKRRSKGDSILV
NIWFIIHSLAKEIDDTGNISGLVDDNVVDDEEEADDDNDSFDSTEDEDQDSDAENVEKKH
KKRKRDHRLEDDDFDLIEENLGVKLKKRKKFSRLRTVSSDEDEEDAEQDEKEVIQDQLFY
GPADDDVAQAPHPEPEMPLIGDAEEEELSDESDVDDFIVDDNGEPISKPQKGMKRRSKGD
SALQNLQDIFGGTFDYADFEKYNEDYEGDDMDEETYYDEQIDDEELAEGSEMLSRRAKKK
SKKARKKKSIFDVMEPDTLEKGFYTDIDAEIRSTDIPERFQLRAIPVRPAEESELEMEAD
WIYKYCFVESTLSKQDPIEDFGSNFNASVLSSLNRKPQSCVGKIQDTLNFMRNQQFETPF
IAFYRKEYVEPELNIHDLNKIYHWDEKWTQLNNRKANLTRLLQKMQTYQYEQISADPDKP
LGDNVRALSDSDIERIQTVQTMEELRDVYGHFLLHYGRDIPKMQNALRIQRKRERAEEGE
TPSGEAPTQASDLKQASRRDMYTVCLNAGLGGVANKFGLTPEQFGENLRDNYQRHETEQY
PAEPLDLAEDFVCPQFSTKEAVLEGARYMVAMQLAREPLVRQCVRQTFTERAKLTVQPTK
KGKKEIDESHPCFRFKWMSNKMVKDLSGPQFLHIQNAETEGLLSVKFHVDMKDAPSAQTY
FEEIKQLYYRDEFSHLVQEWNAQRSKAVEFMLNNILYVEMTKEIRTILCNEAKDGIKEDE
FSHLVQEWNAQRSKAVEFMLNNILYVEMTKEIRTILCNEAKDGIKEQCGLKLRSYLSVAP
YLVEEREFDDVDDDTRVGTYVMAISYSEDRNMATFAAVVAGNGEVVDYLRLPSMRFRKNS
PNEHEAKEKQKDMEAIKKFVTKRRPHVVVIGVEDRFATTLQEDVRQCVTELEQEGIVSNV
AVELMDNELSSTDFRHFPNELRQAISLARRLQDPLLEFSQLCTTDEDLSCLKLHSLQDML
NKDELLETLAEEFVFRANEVGVDVNRAITHPHTANVVQFVCGLGPRKAANLLKVLKQKNG
KLENRSNLVTVCKMGPKIFINCAGFIKIDTKSIMEDSTDAYIEILDGLRVHPETYEWARK
MAVDALEYDESAEDANPSSALSEILESPERLKDLDLDAFAEELERQGYGNKGITLYDIRN
ELNSRYKDFRNPYRPPTSEEKFEIVTKETLSTFREGKLVTCRVTGIAHRRPKSEQLDQAE
PHKDEDTGLWSCSFCKTGGFAELSEVWSHLDSGECPGKAVGVRVRLENGIAGFIPTDKLS
DKPVNNPEERVQVGMTIHCRILKLDIDRFQVDLTCRGSDLRDDENKWKQQLDTYYDFEAE
TADKQKSEDTNKNTNQTRSDHLTATWKVAEGVCAHIDIREEKKENAFSLGRSLWIGNEEF
EDLDEIIARFIQPMAANARDLINHKNYREVGGKKEVMEDLLKQAKKALPSRIPYLMTASK
TLPSKFLLSYMPRVRSKHEYVTVSPDGFRYRGQMFNNLNHLFKWFKEHFRDPIPSHMMSR
TPAGSASVNMSITPSTPRSKRHTPRTPKGTPQQTPQAQPGYPYTPNTPYMTPSGGYGRTQ
ASPAGMYPPKQAPPAKWAQPAGTAPKRTPRPKTGPPSAPVPPADWTRAAQEWASKQHAPS
PRMTPNTPRGPRTPAGSYKGTPRTPQHRTPRNQRTPGY
Nucleotide sequence
Length: 5,697
>Phmamm.CG.MTP2014.S316.g07151.01.t
ATGGCTGATTATATGGATTACGAGGCAGAAGAATCTTCTGACGAGGAATATGACGTGAAA
CGAGGTCGGACTGTACTCGATAGTGAAGACGAAGAAGAAAATGAAAAAGAAGAATCTTCT
GACGAGGAATATGACGTGAAACGAGGTCGGACTGTGCTCGATAGTGAAGACGAAGAAGAA
AATGAAAAAGCACTTGCCAAAGAGATAGACGACACTGGAAACATATCCGGCTTGGTGGAT
GACAATGTTGTTGACGATGAAGAAGAAGCAGATGACGATAATGATAGTTTTGATTCCACT
GAGGATGAAGATCAAGACTCAGATGCTGAAAATGTTGAAAAAAAACACAAGAAACGAAAA
CGTGACCACAGACTCGAAGATGATGACTTTGACTTGATTGAGGAGAATCTTGGAGTCAAG
CTGAAAAAGAGAAAGAAGTTTTCTCGACTCCGCACAGTTTCATCGGATGAGGATGAAGAG
GATGCTGAACAGGATGAAAAAGAAGTCATCCAGGATCAGCTCTTCTATGGACCAGCAGAT
GATGATGTGGCTCAGGCTCCACATCCAGAACCTGAAATGCCGTTGATTGGAGACGCTGAA
GAAGAGGAATTATCGGATGAAAGTGATGTAGATGATTTTATTGTGGATGATAATGGAGAA
CCAATCAGCAAACCACAGAAGGGAATGAAAAGAAGAAGCAAGGGAGACTCAATTTTGGTA
AATATTTGGTTTATCATTCATTCACTTGCCAAAGAGATAGACGACACTGGAAACATATCC
GGCTTGGTGGATGACAATGTTGTTGACGATGAAGAAGAAGCAGATGACGATAATGATAGT
TTTGATTCCACTGAGGATGAAGATCAAGACTCAGATGCTGAAAATGTTGAAAAAAAACAC
AAGAAACGAAAACGTGACCACAGACTTGAAGATGATGACTTTGACTTGATTGAGGAGAAT
CTTGGAGTCAAGCTGAAAAAGAGAAAGAAGTTTTCTCGACTCCGCACAGTTTCATCGGAT
GAGGATGAAGAGGATGCTGAACAGGATGAAAAAGAAGTCATCCAGGATCAGCTCTTCTAT
GGGCCAGCAGATGATGATGTAGCTCAGGCTCCACATCCAGAACCTGAAATGCCGTTGATT
GGAGACGCTGAAGAAGAGGAATTATCGGATGAAAGTGATGTAGATGATTTTATTGTGGAT
GATAATGGAGAACCAATCAGCAAACCACAGAAGGGAATGAAAAGAAGAAGCAAGGGAGAC
TCGGCACTTCAAAATCTGCAAGACATTTTTGGTGGAACTTTCGATTACGCTGACTTCGAA
AAATACAATGAAGATTATGAAGGAGATGACATGGATGAAGAAACATACTATGATGAGCAG
ATTGACGACGAAGAACTTGCAGAAGGCAGTGAAATGCTAAGCAGAAGAGCCAAGAAAAAA
AGCAAGAAAGCTCGCAAAAAGAAATCTATCTTTGATGTTATGGAGCCTGACACCTTAGAG
AAGGGTTTCTACACAGACATTGATGCAGAAATCAGAAGCACTGATATTCCGGAGAGGTTT
CAGTTACGTGCCATACCTGTCAGACCAGCAGAAGAAAGTGAGCTTGAAATGGAAGCAGAT
TGGATTTACAAGTACTGCTTTGTTGAATCTACTTTGTCAAAACAGGATCCAATTGAAGAT
TTTGGTTCAAATTTTAATGCATCAGTATTGTCATCCCTGAACAGAAAACCACAATCTTGT
GTGGGAAAAATACAGGACACCTTAAATTTTATGCGTAACCAGCAATTCGAGACGCCATTT
ATTGCTTTCTACCGCAAGGAATATGTTGAACCTGAGCTAAATATTCACGACCTGAACAAG
ATTTACCACTGGGATGAGAAATGGACTCAGTTGAACAACAGAAAAGCGAATCTTACCAGA
TTATTACAAAAGATGCAAACCTACCAATATGAACAGATATCAGCCGATCCAGATAAACCA
CTGGGTGATAATGTTCGTGCTTTGTCAGACTCAGATATTGAAAGAATTCAAACCGTTCAA
ACTATGGAGGAATTACGAGATGTGTATGGGCACTTTCTGCTTCACTATGGAAGAGATATC
CCTAAAATGCAGAACGCACTACGGATTCAACGCAAGCGGGAACGCGCGGAGGAGGGGGAA
ACACCTTCGGGTGAAGCACCTACTCAGGCGTCCGATCTCAAACAGGCTTCCCGCCGAGAT
ATGTACACTGTGTGTCTTAACGCAGGACTGGGTGGTGTCGCCAACAAGTTCGGTTTGACA
CCGGAACAATTCGGTGAAAATCTTCGAGATAATTATCAACGTCACGAAACAGAGCAATAT
CCAGCTGAACCACTAGATCTTGCGGAAGATTTTGTCTGTCCACAATTCAGCACTAAAGAA
GCAGTATTAGAGGGAGCTCGTTACATGGTTGCCATGCAACTAGCACGTGAGCCGCTTGTA
CGTCAGTGCGTACGTCAAACTTTCACTGAACGAGCCAAGTTGACCGTCCAACCCACCAAG
AAGGGGAAAAAAGAAATTGACGAATCCCATCCTTGTTTCCGATTCAAATGGATGAGCAAC
AAAATGGTGAAGGATTTGAGCGGGCCACAGTTTCTTCACATACAAAATGCGGAGACAGAA
GGTCTCCTCAGTGTTAAGTTCCATGTTGATATGAAAGATGCACCGAGCGCTCAAACCTAC
TTTGAAGAAATCAAACAGCTTTACTACAGGGACGAGTTCAGTCATCTTGTACAAGAGTGG
AATGCCCAACGAAGCAAAGCTGTAGAATTTATGTTGAACAATATTCTCTATGTGGAAATG
ACCAAAGAAATTCGGACGATTCTATGCAACGAGGCCAAAGACGGTATCAAGGAGGACGAG
TTCAGTCACCTTGTACAAGAGTGGAATGCCCAACGAAGCAAAGCTGTGGAATTTATGCTG
AACAATATTCTCTATGTGGAAATGACCAAAGAAATTCGGACGATTCTATGCAACGAGGCC
AAAGACGGTATCAAAGAGCAATGTGGTTTGAAACTGCGCAGCTATTTAAGTGTCGCTCCA
TATTTGGTGGAAGAACGTGAGTTTGATGATGTGGATGACGACACCAGAGTGGGAACATAC
GTCATGGCCATATCGTACTCAGAGGACAGGAACATGGCAACATTCGCAGCAGTTGTGGCT
GGTAACGGTGAAGTAGTGGATTATTTGAGATTGCCTTCAATGAGATTCAGGAAGAATTCA
CCGAACGAACACGAGGCCAAAGAGAAACAAAAGGACATGGAAGCTATAAAGAAATTTGTG
ACGAAAAGGCGCCCCCATGTGGTTGTGATAGGAGTCGAAGACCGATTTGCAACCACATTA
CAAGAAGATGTGCGACAATGCGTAACAGAACTAGAACAAGAGGGAATTGTGTCAAATGTG
GCTGTAGAACTAATGGACAATGAACTGTCGTCGACCGACTTTCGTCATTTTCCAAACGAG
CTTCGTCAAGCGATATCTCTCGCTCGAAGACTTCAAGACCCACTTCTTGAGTTTTCTCAA
CTTTGCACAACAGATGAAGACCTCTCCTGCCTCAAACTGCATTCCTTGCAAGATATGCTC
AACAAGGACGAATTGCTGGAAACCTTAGCTGAGGAGTTCGTGTTCCGTGCAAACGAAGTT
GGTGTAGATGTGAATCGTGCCATCACACACCCTCACACAGCTAATGTTGTGCAGTTTGTG
TGTGGACTAGGACCGAGAAAGGCTGCCAACCTATTGAAGGTGTTGAAGCAGAAGAATGGA
AAACTTGAAAATCGTTCGAACCTGGTGACAGTCTGTAAGATGGGACCGAAAATTTTCATC
AATTGTGCCGGTTTCATTAAAATTGACACCAAGTCTATCATGGAGGATAGTACCGACGCC
TACATAGAAATCTTAGACGGGCTTCGAGTTCATCCCGAGACTTACGAATGGGCTCGCAAG
ATGGCGGTAGACGCACTGGAGTATGACGAATCTGCCGAAGATGCGAATCCCTCATCCGCT
CTAAGCGAAATCCTCGAATCCCCCGAAAGATTGAAGGATTTAGATTTGGACGCCTTTGCA
GAAGAACTTGAACGACAGGGATATGGAAACAAGGGTATTACGTTGTACGATATCCGAAAT
GAACTAAACAGTCGTTACAAGGATTTTCGGAATCCCTACAGACCACCGACATCTGAAGAA
AAGTTTGAAATCGTTACCAAGGAAACCCTTTCAACTTTCCGCGAAGGCAAGTTGGTCACG
TGCCGGGTCACGGGTATTGCACACAGACGGCCTAAATCGGAGCAACTCGATCAAGCGGAA
CCGCACAAGGACGAAGACACAGGGTTGTGGAGCTGCTCCTTCTGTAAAACTGGCGGATTC
GCCGAACTTAGTGAGGTGTGGTCGCATCTCGATAGCGGGGAATGCCCGGGTAAGGCTGTT
GGAGTGAGAGTTCGGTTGGAGAATGGAATCGCCGGTTTTATTCCTACAGATAAACTCAGC
GACAAACCGGTCAACAACCCAGAGGAAAGAGTTCAAGTTGGAATGACAATACATTGTCGT
ATCCTCAAACTTGACATTGACCGTTTCCAAGTCGACCTCACATGTCGAGGTTCTGATCTA
AGAGATGACGAAAACAAATGGAAACAACAACTTGACACATATTACGATTTTGAAGCGGAG
ACAGCCGACAAGCAAAAGTCCGAAGACACAAACAAAAATACCAACCAAACCAGATCCGAT
CACCTGACCGCCACGTGGAAGGTAGCAGAAGGAGTTTGTGCCCACATTGATATCAGGGAA
GAGAAAAAAGAAAATGCGTTCAGTTTGGGTCGATCACTGTGGATTGGAAACGAGGAATTT
GAGGACTTGGACGAAATCATCGCTCGCTTTATTCAACCTATGGCAGCAAATGCACGCGAT
CTCATCAACCACAAGAATTACAGAGAAGTGGGGGGTAAAAAAGAGGTGATGGAAGATCTT
TTGAAACAAGCCAAGAAGGCTCTTCCATCCAGGATTCCATACCTCATGACTGCGTCCAAA
ACTCTTCCTAGTAAGTTTCTCCTCTCTTACATGCCTCGTGTTCGTTCTAAGCATGAATAC
GTCACCGTTTCGCCTGATGGCTTTCGGTACAGAGGTCAAATGTTCAATAATCTCAATCAC
TTGTTTAAATGGTTCAAGGAGCACTTCAGAGACCCAATTCCAAGTCACATGATGTCACGT
ACGCCGGCTGGTTCCGCATCAGTGAACATGTCAATCACTCCGAGCACGCCAAGGAGCAAA
AGACACACACCGCGAACACCAAAGGGGACTCCTCAACAGACCCCGCAGGCCCAACCTGGT
TACCCCTACACCCCCAACACGCCGTACATGACCCCTAGTGGAGGTTACGGACGTACACAG
GCGTCACCCGCTGGCATGTATCCTCCCAAGCAAGCGCCCCCAGCCAAATGGGCCCAGCCG
GCAGGGACAGCCCCTAAACGGACACCACGACCAAAGACTGGCCCACCGTCTGCACCAGTC
CCCCCTGCCGACTGGACTCGTGCCGCCCAGGAATGGGCCTCAAAACAGCACGCCCCCAGT
CCTCGAATGACCCCAAATACCCCACGCGGTCCACGGACCCCAGCTGGAAGTTACAAGGGC
ACTCCAAGGACGCCTCAGCACCGAACACCAAGAAATCAGCGTACACCAGGATATTAA
| PANTHER |
TF_Spt6 (IPR017072) - T[1-233] 0.0 - T[265-957] 0.0 - T[957-1734] 0.0 |
| PIRSF |
TF_Spt6 (IPR017072) - T[4-243] 2.8E-9 - T[247-958] 7.2E-178 - T[948-1579] 1.1E-207 - T[1576-1781] 4.7E-66 |
| Pfam |
Spt6_acidic_N_dom (IPR028083) - T[54-155] 1.8E-7 - T[264-339] 5.2E-9 |
| Gene3D |
Tex-like_HTH_dom_sf (IPR023319) - T[527-703] 1.1E-6 |
| Pfam |
Spt6_HTH_DNA-bd_dom (IPR028088) - T[529-647] 1.2E-21 |
| Gene3D |
Tex-like_dom_sf (IPR023323) - T[742-956] 1.0E-68 - T[957-1038] 9.8E-13 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[1039-1183] 5.54E-18 |
| SMART |
YqgF/RNaseH-like_dom (IPR006641) - T[1039-1154] 1.2E-9 |
| Pfam |
Spt6_YqgF (IPR028231) - T[1040-1182] 1.1E-27 |
| Gene3D |
YqgF/RNaseH-like_dom_sf (IPR037027) - T[1042-1172] 2.7E-11 |
| Pfam |
Spt6_HHH (IPR032706) - T[1186-1289] 4.0E-38 |
| SUPERFAMILY |
RuvA_2-like (IPR010994) - T[1196-1289] 3.56E-13 |
| SMART |
S1_dom (IPR022967) - T[1475-1536] 6.0E-4 |
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[1480-1538] 2.18E-9 |
| Pfam |
S1_domain (IPR003029) - T[1480-1536] 3.1E-8 |
| ProSiteProfiles |
S1_domain (IPR003029) - T[1481-1536] 14.419 |
| Gene3D |
SH2_dom_sf (IPR036860) - T[1573-1639] 2.0E-22 - T[1640-1732] 1.3E-5 |
| Pfam |
Spt6_SH2 (IPR035420) - T[1578-1728] 2.4E-55 |
| CDD |
Spt6_SH2_N (IPR035019) - T[1579-1630] 1.32215E-24 |
| CDD |
Spt6_SH2_C (IPR035018) - T[1639-1729] 1.47739E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPT6H_HUMAN | 49.065 % | 1479 | 0 |