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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S320.g07200.01.t

Possible name(s)

CD209; CRISPLD1; CRISPLD2

Location

S320 [57,823 / 61,593]

Sequences

Amino acid sequence

Length: 296

>Phmamm.CG.MTP2014.S320.g07200.01.p
MLLLNSLRLYFTVMAVLQTCEAMEATCDTKLSDLKHSITKVICPGGCWMQHSDLCGTDDY
ARGPLCLAAMHAGLVDNLGGYFEVFKSDPLPKYSKSERFGVASKSCRTATETYSFQMKCS
TKGNTESSVTDVDCPSGCGSNYVCGINLYNSNSSVCAAAIHAGVLSVRQDHIISNDLRSW
DDSRAYCRSLGGDLATWGIRDSAKRNSIITNLLKPLGSGKVYFWIGLTDKDREGSFVYLD
GVEMTSSNTDFHEGEPNDGGGLGPNADCVHIYLKNGVYKMDDNNCWYLKFAICERT

Nucleotide sequence

Length: 891

>Phmamm.CG.MTP2014.S320.g07200.01.t
ATGTTGTTATTAAATTCTTTGAGACTCTACTTCACCGTCATGGCTGTCTTGCAAACTTGT
GAAGCAATGGAAGCCACATGTGATACAAAACTGTCGGATTTAAAACACTCGATCACAAAA
GTGATTTGTCCCGGCGGCTGTTGGATGCAACATTCAGATTTATGTGGGACTGACGACTAC
GCCAGAGGTCCTCTGTGTCTTGCTGCGATGCATGCTGGACTGGTGGACAATTTGGGTGGA
TATTTTGAAGTGTTTAAAAGTGATCCTCTTCCCAAATACAGTAAATCTGAGAGATTTGGC
GTCGCAAGCAAATCATGCCGGACTGCTACCGAAACCTACTCGTTTCAAATGAAATGCAGC
ACAAAGGGAAACACAGAGTCTTCTGTGACTGATGTTGATTGTCCTTCTGGTTGTGGTTCG
AACTACGTGTGTGGGATAAATTTGTACAATAGCAATTCGTCTGTGTGTGCGGCTGCTATC
CACGCCGGGGTTTTAAGTGTTCGCCAGGACCATATTATATCAAATGACCTAAGGAGCTGG
GACGATTCGAGAGCATATTGCAGGTCTCTTGGCGGGGATCTGGCCACTTGGGGTATAAGA
GATTCGGCTAAACGAAACTCTATTATAACCAACTTGCTGAAACCCCTTGGGTCGGGTAAA
GTATACTTCTGGATCGGTTTGACAGACAAAGACAGAGAGGGATCTTTTGTCTACCTGGAC
GGAGTAGAAATGACTTCAAGCAATACTGACTTCCACGAGGGTGAACCAAATGATGGGGGT
GGCTTGGGACCCAATGCGGACTGTGTGCACATTTACCTTAAAAATGGCGTGTACAAAATG
GACGATAATAATTGCTGGTACTTGAAATTTGCAATTTGCGAAAGAACCTGA

InterProScan

ProSiteProfiles
LCCL (IPR004043) - T[21-113] 17.617 - T[122-166] 10.96
Gene3D
LCCL_sf (IPR036609) - T[21-118] 2.6E-15
SMART
LCCL (IPR004043) - T[23-104] 2.0E-9 - T[115-197] 0.0076
SUPERFAMILY
LCCL_sf (IPR036609) - T[24-115] 1.83E-17 - T[117-175] 1.19E-9
Pfam
LCCL (IPR004043) - T[27-109] 1.6E-12 - T[124-170] 6.9E-9
SMART
C-type_lectin-like (IPR001304) - T[144-294] 1.3E-12
Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[163-296] 3.2E-25
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[171-294] 14.592
SUPERFAMILY
CTDL_fold (IPR016187) - T[172-295] 2.8E-23
Pfam
C-type_lectin-like (IPR001304) - T[178-295] 3.5E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value