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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3217.g17557.01.t

Possible name(s)

NLRP7; NOD2

Location

S3217 [6,748 / 8,941]

Sequences

Amino acid sequence

Length: 246

>Phmamm.CG.MTP2014.S3217.g17557.01.p
MKVIYITWIKLEETYVCINLLSLDVNKVTDKSASAIASCIHNIEELDLWNCQLTSFGICK
IAEAISKLSQPIKLLDLGRNKVTDESASAIASCIHNITELILSDCKLTIVGICKIAEAIS
NLTQSIKLFDLGRNKVTDKSASAIASCIHNIEELKLWDCQLTSVGICKIAEAISNLAQPM
KSLGIGENSLDEKAENCLFGCLHNIRNKLNVSKFYTSADFESKYSRLPQPLLVIDPNLIL
LKIDLE

Nucleotide sequence

Length: 741

>Phmamm.CG.MTP2014.S3217.g17557.01.t
ATGAAAGTGATCTACATAACATGGATTAAATTGGAAGAGACATATGTGTGCATTAACTTA
TTAAGCCTTGATGTGAACAAAGTCACTGATAAAAGTGCATCTGCAATAGCTTCCTGTATT
CATAACATTGAGGAATTGGATCTATGGAATTGTCAACTGACAAGTTTTGGAATTTGTAAA
ATTGCTGAAGCTATTTCCAAACTTTCACAACCAATCAAATTATTAGACCTTGGCAGGAAC
AAAGTCACTGATGAAAGTGCATCTGCAATAGCTTCCTGTATTCATAATATTACTGAACTG
ATTCTGTCGGATTGTAAACTGACAATTGTTGGAATTTGTAAAATTGCAGAAGCTATTTCC
AACCTTACACAATCTATTAAATTATTTGACCTTGGTAGGAACAAAGTCACTGATAAAAGT
GCATCTGCAATAGCTTCCTGCATTCATAATATCGAGGAATTGAAACTGTGGGATTGTCAA
CTGACAAGTGTTGGAATTTGTAAAATTGCAGAAGCCATTTCCAACCTTGCACAACCAATG
AAATCACTTGGCATCGGTGAAAACTCTTTGGACGAGAAAGCAGAAAATTGTTTGTTCGGA
TGTTTGCACAACATCCGAAATAAACTTAATGTGTCAAAATTTTACACAAGTGCAGATTTT
GAATCTAAATACTCAAGATTACCTCAACCACTCTTAGTTATTGATCCAAATTTGATCCTC
CTGAAGATTGACCTCGAATGA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[10-223] 6.7E-35
Pfam
Leu-rich_rpt (IPR001611) - T[42-68] 1.4 - T[73-91] 0.038 - T[126-145] 0.98

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value