- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S327.g07317.02.t
Possible name(s)
PUF60; U2AF2
Gene model
Location
S327 [154,418 / 156,446]
Amino acid sequence
Length: 422
>Phmamm.CG.MTP2014.S327.g07317.02.p
NGMNYQEGMMPGMGMPPGGYNGEMPYGNLPGSEMKQEPPSKEERHGERSSSGRHRDRKRS
RDRERRKRSRSRDRGRRHRSRSRDKKRRSRSKERSERSKPKRKYRYWDVPPVGYEHVTPL
QYKAMQAAGQIPLVASSQVLGSVGGGAAETTLQVPVAGSQMTRQARRLYVGNIPFGVTED
AMMEFFNNQMHVAGLSQAPGDPILAVQINLDKNFAFLEFRSVDETSQALAFDGINFMNQS
LKIRRPSDYKPLPGSADQPAVHLPGVISTVVQDSQHKIFVGGLPNYLGDDQVKELLTSFG
PLRAFNLVKDSATGLSKGYAFAEYVDYLITDQAIAGLNAMQLGEKKLIVQRASVGAKNNP
FGAILAPVTLQIPGMVQATGAGAPTSVLCLMNMVTPEELEDDDEYEDILEDIRDECNKLG
KV
Nucleotide sequence
Length: 1,266
>Phmamm.CG.MTP2014.S327.g07317.02.t
AATGGAATGAACTACCAGGAAGGTATGATGCCAGGAATGGGTATGCCTCCTGGTGGTTAC
AACGGAGAAATGCCATATGGAAACTTACCAGGCAGTGAAATGAAACAAGAACCACCATCC
AAGGAGGAAAGACATGGTGAGCGCAGCAGTTCTGGAAGGCATCGCGACAGGAAGCGTAGT
CGAGATCGCGAACGAAGAAAGAGAAGCAGAAGTCGTGATAGGGGTCGAAGGCACCGTTCT
CGTAGCAGAGACAAGAAGCGAAGATCCAGAAGCAAGGAGCGATCTGAACGAAGCAAACCA
AAAAGAAAATATCGCTATTGGGATGTTCCTCCAGTTGGCTACGAACATGTGACACCTCTC
CAATACAAAGCGATGCAAGCTGCCGGACAGATTCCACTGGTTGCATCATCTCAAGTCTTG
GGCAGCGTGGGTGGTGGAGCTGCAGAAACTACACTTCAGGTCCCAGTTGCTGGTAGTCAA
ATGACAAGGCAGGCAAGAAGACTCTATGTTGGAAACATTCCATTTGGAGTTACTGAAGAT
GCTATGATGGAGTTTTTTAACAACCAAATGCATGTTGCTGGACTTTCACAAGCACCCGGT
GATCCAATTTTGGCTGTACAAATAAACTTGGACAAAAATTTTGCATTTCTGGAGTTCCGT
TCGGTTGATGAAACATCACAAGCTCTTGCATTTGATGGCATAAACTTCATGAATCAGTCA
TTGAAGATCCGCAGGCCAAGTGATTACAAACCACTTCCAGGCAGTGCAGACCAACCCGCT
GTGCATCTGCCAGGAGTTATCTCTACAGTGGTTCAAGATTCACAGCACAAAATTTTTGTC
GGAGGACTTCCAAACTATCTTGGTGATGATCAAGTAAAAGAGTTGCTGACTTCCTTTGGC
CCATTGAGAGCATTCAATCTTGTTAAGGACAGTGCCACGGGGTTGTCAAAGGGTTATGCT
TTTGCAGAGTATGTTGACTATTTGATTACAGATCAAGCAATAGCAGGTTTAAATGCAATG
CAGCTTGGAGAGAAGAAGTTAATTGTACAGAGAGCTAGTGTTGGAGCAAAGAATAATCCA
TTTGGTGCCATCCTAGCACCTGTTACCTTGCAGATACCTGGTATGGTCCAAGCTACTGGT
GCAGGAGCCCCTACTTCTGTGTTGTGTCTTATGAACATGGTTACTCCAGAAGAGCTGGAA
GATGATGATGAATATGAAGATATTCTTGAAGATATTAGAGATGAATGCAATAAGCTTGGG
AAGGTA
| TIGRFAM |
U2AF_lg (IPR006529) - T[44-422] 1.9E-116 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[165-353] 2.77E-32 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[166-349] 2.6E-58 - T[252-327] 2.6E-58 - T[381-422] 1.1E-11 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[166-248] 13.464 - T[276-354] 14.607 |
| SMART |
RRM_dom (IPR000504) - T[167-244] 3.3E-10 - T[277-350] 6.6E-15 |
| Pfam |
RRM_dom (IPR000504) - T[168-241] 6.0E-6 - T[278-347] 1.5E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U2AF2_HUMAN | 68.481 % | 457 | 3.73E-159 |