Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3281.g17610.01.t

Possible name(s)

ECHDC2; ECHS1; ECI1

Gene model

Phmamm.CG.MTP2014.S3281.g17610

Location

S3281 [1,138 / 3,008]

Sequences

Amino acid sequence

Length: 284

>Phmamm.CG.MTP2014.S3281.g17610.01.p
MLKTALCRTWLSSKTSFNTFGRRCFGHGNVSVDLQSDTGIATVTLSEPPVNSLSGEFLTS
ISKTMKELSADSSVSGLLITSKFHGKVFSAGLNILEMYNKSDSYLGEFWRSVQEWYIDTY
NFPKPVVAAINGHAPAGGCAFALMCDYRVLLDGKTIGLNETQLGIAAPFFFTYLMSSTIG
IRQAELALANGTMFSSDQALQANLVDEVVPLDLVIPNAMNQLQKMIKIPQPAFSLSKGQF
RGPNVKKLLGEREEDIATFVGLLQKPYVQKVLGKYLENLKNRKK

Nucleotide sequence

Length: 855

>Phmamm.CG.MTP2014.S3281.g17610.01.t
ATGCTGAAAACTGCATTGTGTCGTACTTGGTTAAGTTCTAAAACGTCTTTCAATACGTTT
GGAAGAAGATGTTTTGGTCATGGAAATGTTTCAGTTGATCTTCAATCAGATACAGGTATT
GCCACAGTCACCCTTTCTGAACCACCAGTTAACAGTCTGAGTGGAGAATTTTTAACAAGT
ATCTCCAAAACTATGAAGGAGCTTTCAGCTGATTCCTCTGTTTCTGGCTTGTTAATCACC
TCAAAGTTTCATGGAAAAGTATTTTCTGCTGGACTTAATATTTTGGAAATGTACAACAAA
TCAGATTCATATCTGGGAGAGTTTTGGAGAAGTGTTCAAGAATGGTACATTGACACATAC
AACTTTCCTAAACCAGTAGTAGCTGCTATTAATGGACATGCTCCAGCGGGTGGCTGTGCA
TTTGCACTTATGTGTGATTATAGAGTATTGCTTGATGGAAAAACAATTGGCCTAAATGAA
ACTCAACTTGGTATTGCTGCCCCATTTTTTTTCACATATCTTATGTCATCAACAATAGGC
ATTCGGCAAGCAGAATTAGCACTAGCAAATGGAACGATGTTTAGCTCCGATCAGGCATTG
CAAGCTAATCTGGTTGATGAGGTTGTTCCACTTGACCTTGTTATTCCAAATGCAATGAAT
CAACTGCAAAAAATGATAAAAATTCCACAACCTGCATTTTCATTATCCAAAGGACAATTT
CGTGGACCAAATGTGAAAAAATTACTTGGTGAAAGGGAAGAAGATATTGCAACGTTTGTG
GGATTGTTGCAAAAGCCATATGTGCAAAAGGTTCTCGGGAAGTACTTGGAAAACCTCAAG
AACAGAAAAAAGTAG

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[36-282] 4.38E-51
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[37-280] 1.2E-47
ProSitePatterns	Enoyl-CoA_hyd/isom_CS (IPR018376) - T[127-147] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHD2_HUMAN	30.46 %	79.7	2.32E-17
ECI1_HUMAN	42.264 %	207	7.67E-66