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TRANSCRIPT CARD

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  1. Molecular Tool 'Hr-FoxB MO3 (Hashimoto 2011)' > 
  2. Transcript 'KH2012:KH.C8.640.v2....' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3286.g17613.01.t

Possible name(s)

CD22; IGSF10; TTN

Gene model

Phmamm.CG.MTP2014.S3286.g17613

Location

S3286 [2,653 / 7,483]

Sequences

Amino acid sequence

Length: 443

>Phmamm.CG.MTP2014.S3286.g17613.01.p
MVVIDTTYSQPHTRNVTIKECQKHLFFNLSVDAPNGFYDTEGEFTCSSGGSLFTDSGTPA
DKNTICLSTAEWNREDSVECWLDPPSLIKISIASSYLSIENEFGVFLNGEQTATLNCSQE
ANPTAKCEFQIGEIIQSESSCVLSYSFTDAVFVSCNASNIVGSDLSQLNVTVVTERSSKV
TQSDVNNTSNKAGENVALSCLVDYSVELDTKYQWQIPDQTRITDKQTNILNLTNLTRLDL
GHYLCKTSDAFGNYTSNYFLNVTYAIVVCPSCSLATDSNDITNQTFVLMVEITAETETYN
LKIKSPMEGFDDLVIEFVISKESNIPDGNSNQTVIIVASVVGSVAVIAFVAFAAFCVARK
RKENNKATKSNKDPVYENTFDMKNEATDPQYEVPLDRIRHDYENVDPQEGYAYSTNIGTG
HINDSNTKTNSFYENQPQYTKVA

Nucleotide sequence

Length: 1,332

>Phmamm.CG.MTP2014.S3286.g17613.01.t
ATGGTAGTGATTGATACGACATACAGTCAACCACACACAAGGAATGTTACTATTAAAGAA
TGTCAGAAACATTTATTCTTTAATCTGTCTGTGGATGCACCAAATGGATTTTATGACACC
GAAGGAGAATTTACTTGTTCCAGTGGCGGAAGTTTGTTCACAGACAGTGGAACACCGGCT
GATAAAAATACAATATGTTTGTCAACTGCTGAATGGAATAGAGAGGATTCGGTTGAATGC
TGGTTAGACCCACCAAGTCTTATTAAGATCTCCATTGCTTCAAGCTATTTATCAATTGAA
AATGAATTCGGTGTTTTTCTTAACGGGGAACAAACAGCCACACTAAATTGTTCACAAGAA
GCAAATCCAACTGCCAAATGTGAATTTCAAATTGGGGAAATTATTCAAAGTGAAAGTTCT
TGCGTATTGTCTTACAGTTTTACTGATGCCGTATTTGTTTCATGCAATGCAAGTAATATT
GTTGGTAGCGATTTGTCACAACTTAATGTCACAGTTGTAACAGAACGATCATCTAAGGTT
ACTCAGTCTGATGTGAACAACACATCCAATAAAGCTGGAGAAAATGTTGCTTTAAGTTGT
TTGGTCGATTATTCTGTCGAACTTGACACAAAGTATCAGTGGCAAATTCCCGATCAGACA
AGGATTACAGACAAACAAACTAATATTTTAAATTTGACTAACCTAACAAGACTAGATTTG
GGACACTACCTATGCAAAACAAGTGACGCTTTTGGAAATTACACGAGCAACTATTTTTTA
AATGTGACATATGCCATTGTTGTTTGTCCAAGTTGTTCATTGGCCACTGATAGTAACGAT
ATCACAAACCAAACATTTGTTTTGATGGTGGAGATTACAGCAGAAACAGAAACTTACAAC
TTAAAAATCAAATCACCAATGGAAGGATTTGATGACCTTGTTATTGAGTTTGTAATATCC
AAGGAAAGCAACATACCTGATGGAAACAGTAACCAAACAGTCATAATCGTTGCAAGTGTA
GTAGGAAGTGTCGCTGTAATCGCGTTTGTTGCATTTGCTGCGTTTTGCGTTGCCAGGAAA
AGAAAAGAAAACAATAAAGCAACCAAATCAAACAAAGACCCCGTTTATGAGAATACATTT
GACATGAAAAATGAAGCCACAGATCCACAGTACGAAGTACCGTTGGATCGGATTCGGCAT
GATTATGAAAATGTTGATCCGCAAGAAGGCTACGCATATTCTACGAATATTGGGACTGGT
CATATCAACGATTCAAATACCAAAACCAACAGTTTTTACGAAAATCAACCCCAATATACA
AAAGTTGCTTAA

InterProScan

Gene3D
Ig-like_fold (IPR013783) - T[175-269] 8.4E-9
ProSiteProfiles
Ig-like_dom (IPR007110) - T[178-263] 8.666
SMART
Ig_sub (IPR003599) - T[185-263] 0.0057
SUPERFAMILY
Ig-like_dom_sf (IPR036179) - T[186-263] 2.64E-9
Pfam
Immunoglobulin (IPR013151) - T[187-258] 1.1E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value