Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S333.g07401.02.t

Possible name(s)

ATP6V1D

Gene model

Phmamm.CG.MTP2014.S333.g07401

Location

S333 [28,676 / 31,360]

Sequences

Amino acid sequence

Length: 210

>Phmamm.CG.MTP2014.S333.g07401.02.p
MSSSERLDIFPSRMNLTIMKTRLKGAHKGHSLLKKKADALKIRFHAVLKKIIEAKQQMGD
IMKEAAFSLAETKFSGGDFSPVVLQNVSKAQLKVRSKQENVAGVKLPAFEYYEDGSDSYE
LTGLARVIIPKIERTISYIITELDEGEREEFFRLKKIQQKKEVKRTAQEAVRKEWEKRQE
KQFGDERLNQVLSTHVPNLLDDKEDDDLLF

Nucleotide sequence

Length: 633

>Phmamm.CG.MTP2014.S333.g07401.02.t
ATGTCTTCAAGTGAAAGACTTGATATTTTTCCTTCTCGAATGAATCTGACTATTATGAAA
ACAAGGCTGAAAGGTGCACACAAAGGTCATAGTTTACTCAAAAAGAAAGCAGATGCTCTG
AAGATTCGATTTCATGCTGTTTTGAAGAAGATCATAGAGGCTAAACAGCAAATGGGTGAT
ATAATGAAGGAGGCTGCATTCTCACTTGCTGAAACCAAGTTTTCTGGTGGTGACTTTAGC
CCTGTAGTTCTGCAAAATGTCAGTAAGGCACAACTCAAAGTCCGAAGCAAGCAAGAAAAT
GTTGCTGGTGTAAAACTGCCAGCATTTGAATACTACGAGGATGGATCAGACAGTTATGAG
CTGACTGGTTTAGCAAGAGTAATTATACCCAAAATCGAACGGACTATTTCATACATCATC
ACTGAGCTGGACGAAGGCGAGAGAGAAGAGTTTTTCAGATTAAAGAAGATTCAACAAAAG
AAAGAGGTCAAGCGTACTGCACAGGAGGCTGTTCGCAAGGAGTGGGAAAAAAGGCAGGAG
AAACAGTTCGGTGATGAGAGGCTAAACCAAGTATTATCTACACATGTTCCAAATCTTCTA
GATGACAAGGAAGATGATGATTTGCTGTTTTAA

InterProScan

PANTHER	V_ATPase_D (IPR002699) - T[1-126] 4.4E-66 - T[126-210] 4.4E-66
TIGRFAM	V_ATPase_D (IPR002699) - T[8-121] 3.8E-26
Pfam	V_ATPase_D (IPR002699) - T[15-126] 1.6E-33 - T[125-159] 1.7E-11

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATD_HUMAN	49.225 %	228	5.89E-76