Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S33.g01309.04.t

Possible name(s)

RPL3; RPL3L

Gene model

Phmamm.CG.MTP2014.S33.g01309

Location

S33 [285,690 / 289,700]

Sequences

Amino acid sequence

Length: 390

>Phmamm.CG.MTP2014.S33.g01309.04.p
QAWRMSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPNDNPTKPCHLTAFITYKAGMTHI
VRDVDRPGSKVNKKEVVEAVTILEAPPMIVVGVIGYIQTPRGLRTLKTIFAEHLSDECKR
RFYKNWHACKKKAFTKSCRKWQDEDGKKQIDRDFNQMKKYCKVIRIIAHTQMKLLPLRQK
KAHMMEIQVNGGSVSEKVDYARDLLEKPFSVSSVFNKDEMIDVIGVNKGHGEKGVTSRWH
TKKLPRKTHKGLRKVACIGAWHPARVAYSVARSGQKGYHHRTEINKKIYRIGAGIHKEGG
KLIKNNASTEIDITDKSITPMGGFPHYGEVKNDFVMLKGCCIGPKKRVLTLRKSLITHTK
RSALEKITLKWIDTSSKFGHGRFQTIEEKR

Nucleotide sequence

Length: 1,172

>Phmamm.CG.MTP2014.S33.g01309.04.t
CAAGCTTGGAGAATGTCGCACAGAAAGTTTTCGGCTCCGCGCCACGGATCGCTGGGATTT
CTGCCCAGGAAGCGTTCATCAAGGCACCGAGGAAAAGTTAAGTCTTTTCCCAATGACAAC
CCGACCAAGCCATGTCACCTGACAGCTTTCATCACATACAAAGCTGGAATGACCCACATC
GTCCGTGATGTTGATCGGCCAGGATCGAAGGTGAACAAGAAGGAAGTGGTTGAAGCTGTG
ACCATCCTTGAAGCTCCACCTATGATTGTGGTTGGCGTGATCGGTTACATACAGACACCA
CGGGGACTTCGCACATTGAAGACCATCTTTGCTGAGCATTTGAGCGACGAATGCAAGCGC
AGATTCTACAAGAACTGGCATGCCTGCAAGAAGAAGGCTTTCACCAAGTCTTGTCGCAAG
TGGCAAGACGAGGATGGGAAGAAGCAGATCGATCGTGACTTCAACCAGATGAAGAAGTAT
TGCAAGGTGATCCGCATCATCGCACATACTCAGATGAAACTTCTACCCCTGCGTCAGAAG
AAAGCTCATATGATGGAAATTCAAGTGAATGGTGGATCTGTCTCTGAGAAAGTTGATTAC
GCTCGTGATTTGTTGGAGAAACCTTTCTCTGTGTCCAGCGTCTTCAACAAGGACGAGATG
ATTGATGTCATTGGGGTCAACAAGGGTCACGGAGAAAAAGGTGTCACATCACGTTGGCAC
ACAAAGAAGTTGCCACGGAAGACACACAAGGGATTGAGAAAAGTGGCATGTATTGGTGCG
TGGCATCCAGCCAGAGTCGCATACTCAGTTGCCAGATCAGGTCAAAAGGGCTACCATCAC
AGAACTGAAATCAACAAAAAGATTTACAGAATTGGTGCCGGAATTCATAAGGAAGGAGGC
AAGCTGATCAAGAACAATGCCTCAACTGAGATCGATATCACTGACAAAAGTATTACCCCA
ATGGGTGGTTTCCCACATTATGGAGAGGTGAAAAATGACTTTGTGATGCTGAAGGGTTGC
TGCATTGGCCCCAAAAAGCGGGTGCTCACCCTTAGAAAGTCTTTGATAACCCACACCAAG
CGTTCAGCTCTCGAGAAGATCACACTCAAGTGGATTGACACCTCGTCCAAATTTGGTCAT
GGTCGCTTCCAAACTATTGAGGAGAAACGCAC

InterProScan

Pfam	Ribosomal_L3 (IPR000597) - T[5-379] 6.4E-180
SUPERFAMILY	Transl_B-barrel_sf (IPR009000) - T[8-379] 2.21E-106

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL3_HUMAN	80.052 %	664	0
RL3L_HUMAN	73.834 %	591	0