Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S33.g01309.05.t

Possible name(s)

RPL3; RPL3L

Gene model

Phmamm.CG.MTP2014.S33.g01309

Location

S33 [286,435 / 289,746]

Sequences

Amino acid sequence

Length: 323

>Phmamm.CG.MTP2014.S33.g01309.05.p
MTHIVRDVDRPGSKVNKKEVVEAVTILEAPPMIVSFVFLVADIRHACKKKAFTKSCRKWQ
DEDGKKQIDRDFNQMKKYCKVIRIIAHTQMKLLPLRQKKAHMMEIQVNGGSVSEKVDYAR
DLLEKPFSVSSVFNKDEMIDVIGVNKGHGEKGVTSRWHTKKLPRKTHKGLRKVACIGAWH
PARVAYSVARSGQKGYHHRTEINKKIYRIGAGIHKEGGKLIKNNASTEIDITDKSITPMG
GFPHYGEVKNDFVMLKGCCIGPKKRVLTLRKSLITHTKRSALEKITLKWIDTSSKFGHGR
FQTIEEKRTFMGPLKKDRVAAST

Nucleotide sequence

Length: 972

>Phmamm.CG.MTP2014.S33.g01309.05.t
ATGACCCACATCGTCCGTGATGTTGATCGGCCAGGATCGAAGGTGAACAAGAAGGAAGTG
GTTGAAGCTGTGACCATCCTTGAAGCTCCACCTATGATTGTGAGCTTTGTATTTTTGGTG
GCTGACATCAGGCATGCCTGCAAGAAGAAGGCTTTCACCAAGTCTTGTCGCAAGTGGCAA
GACGAGGATGGGAAGAAGCAGATCGATCGTGACTTCAACCAGATGAAGAAGTATTGCAAG
GTGATCCGCATCATCGCACATACTCAGATGAAACTTCTACCCCTGCGTCAGAAGAAAGCT
CATATGATGGAAATTCAAGTGAATGGTGGATCTGTCTCTGAGAAAGTTGATTACGCTCGT
GATTTGTTGGAGAAACCTTTCTCTGTGTCCAGCGTCTTCAACAAGGACGAGATGATTGAT
GTCATTGGGGTCAACAAGGGTCACGGAGAAAAAGGTGTCACATCACGTTGGCACACAAAG
AAGTTGCCACGGAAGACACACAAGGGATTGAGAAAAGTGGCATGTATTGGTGCGTGGCAT
CCAGCCAGAGTCGCATACTCAGTTGCCAGATCAGGTCAAAAGGGCTACCATCACAGAACT
GAAATCAACAAAAAGATTTACAGAATTGGTGCCGGAATTCATAAGGAAGGAGGCAAGCTG
ATCAAGAACAATGCCTCAACTGAGATCGATATCACTGACAAAAGTATTACCCCAATGGGT
GGTTTCCCACATTATGGAGAGGTGAAAAATGACTTTGTGATGCTGAAGGGTTGCTGCATT
GGCCCCAAAAAGCGGGTGCTCACCCTTAGAAAGTCTTTGATAACCCACACCAAGCGTTCA
GCTCTCGAGAAGATCACACTCAAGTGGATTGACACCTCGTCCAAATTTGGTCATGGTCGC
TTCCAAACTATTGAGGAGAAACGCACCTTTATGGGACCGCTCAAGAAGGATCGAGTTGCC
GCGTCCACGTAA

InterProScan

SUPERFAMILY	Transl_B-barrel_sf (IPR009000) - T[1-297] 6.8E-78
Pfam	Ribosomal_L3 (IPR000597) - T[1-38] 9.2E-10 - T[46-297] 1.7E-112

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL3_HUMAN	71.387 %	502	8.46E-180
RL3L_HUMAN	65.497 %	453	2.39E-160