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  2. Clone 'cien77658' > 
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  4. Transcript 'Phmamm.CG.MTP2014.S3...'
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Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3426.g17737.01.t

Possible name(s)

COPS2; PSMD11

Gene model

Phmamm.CG.MTP2014.S3426.g17737

Location

S3426 [296 / 5,366]

Sequences

Amino acid sequence

Length: 430

>Phmamm.CG.MTP2014.S3426.g17737.01.p
LLPFLPEFHYTMFNLQSPFLYCIGALYYLSVHFTEFFLVRRDVKSTDEEGLKLKEQSILE
LGTLLQQKGDAVELSSLVTRVRPFLKSISKAKAAKLIRTLVDLFLDMEISSGLEVQLCLE
CIEWAKEEKRTFLRQALEARLVALYYDTGRFQDALKLGSALLRELKKLDDKQLLVEVQLT
ESQTYHALGNLQKAKAALTSARTTANSMYCPPKMQASLDRQSGILNAAEEKDWKTAYSYF
YEAFEGYDSIESKKAVTSLKYMLLCKVMLGTPDDVQSLLSGKLALKYAGRDIEAMKSVAK
ASHNRSISELKEILVQFEGELKADLIIAAHLDKLYDNLLEQNLLRVIEPFSKVQVQHIAQ
LISLPLETVEKKLSQMILDKKFHGILSQGEGVLILFDEPAVDKTYETALDVISSISLVVD
SLYQKAKQLT

Nucleotide sequence

Length: 1,808

>Phmamm.CG.MTP2014.S3426.g17737.01.t
TTCTTTTGCCATTTTTACCAGAATTTCATTACACAATGTTCAATCTTCAATCACCATTTT
TGTACTGTATCGGAGCACTTTATTATTTATCTGTACACTTTACCGAATTTTTTTTAGTGA
GGCGCGATGTGAAGAGCACAGATGAAGAAGGCCTTAAACTGAAGGAACAGAGTATTTTGG
AACTTGGAACGTTACTCCAGCAAAAGGGTGATGCAGTGGAACTTAGCAGTCTGGTCACAC
GGGTTCGTCCATTTCTCAAATCTATCAGCAAAGCAAAAGCTGCTAAACTCATTCGAACTC
TCGTTGACCTTTTTCTTGACATGGAAATCAGTTCTGGATTAGAGGTGCAACTATGTCTTG
AATGCATCGAGTGGGCAAAAGAAGAAAAACGAACATTTTTACGACAAGCTTTGGAAGCAA
GATTAGTTGCTCTTTACTACGACACAGGAAGATTTCAGGATGCACTAAAATTAGGTTCAG
CTTTGTTGAGGGAATTAAAAAAGCTTGATGACAAACAATTACTTGTGGAAGTTCAACTGA
CAGAATCACAAACCTATCACGCACTTGGAAACTTGCAAAAAGCAAAAGCAGCATTGACTT
CAGCTCGTACCACGGCAAACTCGATGTACTGTCCTCCGAAGATGCAAGCTTCTCTCGATC
GACAGTCAGGAATCTTAAATGCAGCAGAGGAAAAAGACTGGAAAACAGCCTACTCCTATT
TCTATGAAGCATTTGAGGGTTATGACTCAATTGAAAGCAAAAAGGCAGTTACTTCGTTGA
AATACATGCTCTTGTGTAAGGTTATGCTTGGAACACCTGACGACGTTCAATCTCTCCTCA
GTGGCAAATTGGCTCTGAAATATGCTGGAAGAGATATCGAGGCAATGAAGAGTGTTGCCA
AGGCCAGTCACAATCGGTCGATCTCAGAGTTGAAGGAAATCCTTGTGCAGTTTGAGGGCG
AACTAAAAGCCGATCTGATCATCGCTGCACATCTCGACAAACTCTACGATAATCTTCTCG
AACAAAACCTGCTGAGGGTGATTGAACCTTTCTCCAAAGTTCAGGTCCAACACATAGCCC
AGTTGATAAGTTTGCCGCTGGAAACTGTTGAGAAAAAATTGTCACAAATGATTCTGGACA
AAAAATTTCATGGAATTCTCTCACAAGGGGAAGGTGTGTTGATTCTGTTCGACGAGCCAG
CTGTGGATAAAACCTATGAAACGGCCTTAGATGTGATCTCCAGTATTTCACTGGTGGTCG
ACAGCCTTTATCAAAAAGCAAAACAACTCACATAATTACAACTCTGCTATTTTCCATCGT
TATATGTGTTTGTGATACAAAATGCTGCAAATAGCCTGTACGTTTCTTTGTGTATGTTGC
TTATGGGGGGAACTTTTTTGTTTTCTGCTTTTCTGTTTTACCGGATTCGGTCGGGCTTTT
GCTGTTGTACTCTTTTCACACTACTTGGATATTTTCTCTGTTACAAAAGTGTCGAACCGG
GGTGAAAATAGACACCATACCTCTTGTACATTTTCTCGCCCCACCAGGATTTCATATTTT
CCAATTTTCTCAGAATTGCATGAATTTTATTTATTTCCAATTCGAGCACGGGGCAAAAAC
GCTATGACGTAACGTTGATGACGTCGATTGCACTGTTTGTGACGTCACTGGACTTGAAAA
GTTGTACATTGCACAATAGCGTCTTGTTTCCGTCCCACTTTGTGAGGTCAGGGGCGCAGG
ATTGTTACGTCACAATAAACTTCCGGTTTGCATAGTTCAACTTTTTCGTCATCAACAAAA
ATTTGAGA

InterProScan

PANTHER
PSMD11 (IPR035295) - T[38-430] 3.2E-195
ProSiteProfiles
PCI_dom (IPR000717) - T[232-400] 17.962
Pfam
PCI_dom (IPR000717) - T[294-395] 5.2E-16
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[324-405] 2.5E-17
SMART
PCI_dom (IPR000717) - T[329-412] 1.0E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSD11_HUMAN 72.01 % 593 0
CSN2_HUMAN 27.917 % 84.3 1.18E-17