- Clone 'cima822738' >
- Transcript 'KH2012:KH.S852.1.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S342.g07556.01.t
Possible name(s)
CIT; PINK1; ROCK1
Gene model
Location
S342 [127,172 / 136,016]
Amino acid sequence
Length: 513
>Phmamm.CG.MTP2014.S342.g07556.01.p
MHRTVETFGTWGYQQITNKCKNVFKTIENVVTKGNAKRAQQVLRSNDVGLHSLFSKDFLW
RRARKGHLIAFAGLFLYQEDIQRQKMEAKAEYHIYDRICSNMKNFFPAEDNSAQILPDDR
GNSLSDYKLTLPVSVDVSGTVFDATLAPEADEKSLWDFCESSLEEEKVFPSQEFSIKAMH
PVPRVVSQPLILKHHGVELSCCGYGQYTFHNGNGPKKKALPPHHNIIRFEKVFFGNLNEE
LNPSECDPTLFAVTKRYETNLALYMRQNNVDNITASLILLQLLQAVVHLENHCFVHRDIT
PENILLEFDSGGIPHVVLSGFGSCFGGRKSELVVPFEDETLDTRVGKLSNLPPEVSRAKP
GKGCKVDYHGNDAWMVGVIAFEMLTGRSLFADHGLDSRTYKESDLPDLNNTKASNTLKAV
ARSLVSVDPQMRMSAKEAAEILHLEIFATVSKAPLGDALLLSNLRSWAVSHCAEVFLHKS
ESSVLYKLCEGFFHQVDAHHLLSSVELWMLINS
Nucleotide sequence
Length: 1,542
>Phmamm.CG.MTP2014.S342.g07556.01.t
ATGCATCGAACTGTCGAAACATTCGGAACATGGGGATATCAACAGATCACAAATAAGTGC
AAAAATGTTTTTAAAACTATCGAGAATGTTGTCACAAAAGGAAATGCAAAAAGAGCTCAA
CAGGTGTTAAGAAGCAATGATGTAGGACTGCACAGTTTATTCAGCAAAGACTTTTTGTGG
AGACGGGCAAGGAAAGGACATCTGATCGCATTTGCTGGATTGTTTCTTTACCAGGAAGAC
ATACAACGTCAGAAAATGGAAGCTAAAGCTGAATATCATATTTATGATAGAATCTGTTCC
AATATGAAGAATTTCTTTCCTGCTGAAGACAACTCAGCACAAATTCTTCCTGACGATCGT
GGAAATAGTTTGTCGGATTATAAACTGACTTTGCCTGTGTCTGTTGATGTGAGTGGAACC
GTATTCGATGCCACATTGGCTCCTGAGGCCGATGAAAAATCGTTGTGGGATTTTTGTGAA
AGTTCATTGGAAGAAGAGAAAGTTTTTCCATCTCAAGAGTTTTCCATCAAAGCAATGCAC
CCGGTGCCCAGGGTTGTGTCCCAACCACTGATATTGAAACATCATGGAGTTGAGCTTTCG
TGTTGTGGATATGGGCAATACACTTTCCACAATGGAAATGGACCTAAGAAAAAAGCATTG
CCACCTCACCACAATATTATAAGATTTGAAAAAGTTTTCTTTGGAAATTTGAATGAAGAA
TTAAATCCATCAGAATGTGATCCCACACTTTTTGCCGTCACCAAGAGGTATGAGACGAAC
CTTGCATTGTACATGAGGCAAAATAACGTTGACAACATTACAGCGTCGCTTATTCTTCTT
CAACTTCTGCAAGCTGTGGTTCATTTGGAAAACCATTGTTTTGTTCACCGGGATATCACA
CCAGAAAACATTTTACTGGAATTTGACTCAGGTGGAATCCCCCATGTTGTCTTATCAGGA
TTTGGTTCGTGTTTCGGAGGCAGAAAATCTGAACTGGTTGTTCCGTTTGAGGATGAAACA
CTTGACACGAGGGTTGGGAAATTATCAAACCTTCCTCCTGAGGTGTCAAGAGCGAAACCT
GGAAAGGGCTGTAAAGTCGATTACCATGGAAATGATGCATGGATGGTTGGGGTCATCGCG
TTTGAGATGTTGACAGGAAGGAGTCTGTTTGCCGATCATGGGTTGGATTCGAGGACTTAC
AAGGAAAGTGATCTTCCCGATTTAAACAACACAAAAGCTTCAAACACATTAAAAGCTGTG
GCTCGAAGTTTGGTCAGCGTTGATCCACAAATGAGAATGAGTGCGAAAGAAGCAGCGGAG
ATTTTGCATCTGGAAATATTCGCAACAGTTTCAAAAGCTCCACTTGGTGATGCCCTTCTG
TTGAGCAACCTTCGATCGTGGGCAGTTTCGCATTGCGCCGAAGTTTTTCTGCACAAAAGT
GAAAGCTCGGTGTTGTACAAATTATGCGAGGGTTTCTTTCATCAAGTGGATGCACATCAT
CTGTTGAGTTCAGTTGAATTGTGGATGTTGATTAACTCGTGA
| SMART |
Prot_kinase_dom (IPR000719) - T[127-447] 2.3E-10 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[127-446] 21.418 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[222-440] 4.37E-28 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[223-439] 5.4E-18 |
| ProSitePatterns |
Tyr_kinase_AS (IPR008266) - T[294-306] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PINK1_HUMAN | 34.717 % | 125 | 7.11E-31 |