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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3436.g17746.01.t

Possible name(s)

AUH; ECHDC2; ECHS1

Gene model

Phmamm.CG.MTP2014.S3436.g17746

Location

S3436 [8,748 / 10,613]

Sequences

Amino acid sequence

Length: 232

>Phmamm.CG.MTP2014.S3436.g17746.01.p
MARQLTVAFKAFENDEQSNVAVLHGIGEHFCAGYDLKELATSKEILSEETKKHMSIHGAM
GPTHLHICKPVIAAVNGYAVAGGLELALLCDLRVFEQSTQVGVLSRRFGVPLIDGGTVRL
PALIGMSKALDLILTGRLLRASEAREMGIANRVTEDGGALSAAVQLAKDISNFPQLCLRA
DRNSTYHSVFDAASIRDSLEYELENAMDVLERESISGAQKFVEGVGRKGMFS

Nucleotide sequence

Length: 699

>Phmamm.CG.MTP2014.S3436.g17746.01.t
ATGGCTCGTCAACTAACTGTTGCTTTCAAAGCATTTGAAAATGATGAACAAAGTAATGTT
GCTGTGCTACATGGAATTGGTGAACACTTTTGTGCTGGTTACGACTTGAAGGAGCTTGCA
ACAAGCAAAGAAATTTTGAGTGAGGAAACAAAAAAGCACATGAGCATTCATGGAGCAATG
GGCCCAACACATTTACACATCTGCAAACCTGTTATAGCTGCAGTAAATGGATATGCAGTT
GCAGGGGGGCTGGAACTTGCCCTTTTATGTGACCTTCGGGTGTTCGAACAATCAACACAA
GTTGGTGTACTAAGCAGGCGTTTTGGTGTGCCCCTTATAGATGGTGGAACGGTTCGCCTT
CCCGCCTTAATTGGAATGTCAAAAGCTCTTGACTTGATTTTGACTGGTCGGTTGTTGCGT
GCATCGGAGGCACGGGAGATGGGAATTGCCAACAGAGTTACTGAAGATGGTGGAGCTTTA
TCGGCAGCAGTTCAACTAGCAAAAGATATATCCAATTTTCCCCAATTATGCCTTCGTGCT
GATCGAAATTCAACTTATCACTCCGTTTTTGACGCCGCCTCCATTCGGGACTCCTTGGAA
TATGAGTTGGAAAACGCAATGGATGTTCTTGAGCGCGAATCTATTTCAGGTGCCCAAAAG
TTTGTTGAGGGTGTTGGCCGAAAAGGGATGTTTTCATAA

InterProScan

SUPERFAMILY
ClpP/crotonase-like_dom_sf (IPR029045) - T[1-211] 3.69E-50
Pfam
Enoyl-CoA_hydra/iso (IPR001753) - T[3-223] 7.9E-35
ProSitePatterns
Enoyl-CoA_hyd/isom_CS (IPR018376) - T[72-92] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ECHM_HUMAN 33.721 % 87.4 1.59E-20
ECHD2_HUMAN 36.686 % 81.6 1.92E-18