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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S3...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S34.g01327.01.t

Possible name(s)

SERPINB1; SERPINB10; SERPINB13

Gene model

Phmamm.CG.MTP2014.S34.g01327

Location

S34 [125,435 / 129,681]

Sequences

Amino acid sequence

Length: 447

>Phmamm.CG.MTP2014.S34.g01327.01.p
MDWKHLTIFCTVFSFVNAFDYETLYTEGGYDLYDYSTDPQVIPGHQHQQKPETVVKRRPI
TLPAAKSVQDFACDLMNSMAADQLPGNTAVSPLSMYTALAMLRPGLGGESLVQVNAAMHT
EGLDEEEICEMYDKVFKPNKKLRLRYANRIYADKSVKLKRQYRTDLKRSLNTTQVRRMDF
TNKLEQCRQKINRYVKKKTRNLIPEMLPEGAVDQSTKLILVNALYMKAPWQAKFEPEGTK
MRKFWLSESTAIQVPTMFHKQYFCTTHGDEITDSDITVLTLEEGVSMLLVMPKQAGNFTR
FYDNEQGSTREKLDNIVRSIWREERRGSRDIGLCAITLPKFNIDHSIDDLKSVLSRMGIQ
DIFNRQSADLSRLTNSGGLYVNDVRHKTSFNVAEDGVEAAAATSIGIMTRSAVNNFRPIN
KPFMYFIRHDSTGALLFAGKVVNPIAT

Nucleotide sequence

Length: 1,344

>Phmamm.CG.MTP2014.S34.g01327.01.t
ATGGACTGGAAACATCTCACAATTTTCTGTACAGTCTTTTCCTTCGTCAACGCATTCGAC
TACGAGACTTTGTACACCGAAGGTGGTTACGACCTCTACGACTACAGCACCGACCCACAG
GTGATACCAGGACACCAACATCAGCAAAAGCCAGAAACAGTCGTAAAAAGACGACCAATC
ACATTGCCAGCCGCTAAATCAGTTCAAGACTTCGCCTGTGACCTCATGAACAGCATGGCA
GCTGACCAGTTGCCAGGCAACACAGCCGTATCGCCACTATCTATGTATACAGCACTGGCT
ATGCTGAGACCAGGTCTTGGAGGCGAGTCATTGGTGCAAGTAAACGCAGCCATGCACACG
GAAGGTTTGGATGAAGAGGAAATTTGCGAAATGTACGACAAAGTGTTCAAACCCAACAAG
AAACTTCGATTGAGATATGCGAACCGGATTTATGCCGACAAGAGCGTTAAGCTGAAAAGG
CAATACAGGACCGACCTGAAGCGGAGTCTTAACACAACACAAGTTCGCCGAATGGATTTC
ACAAACAAACTTGAACAATGTCGGCAAAAGATCAACCGCTATGTTAAGAAGAAAACACGA
AACCTGATTCCTGAAATGCTGCCTGAGGGCGCTGTTGACCAGTCTACAAAACTCATACTC
GTCAACGCACTTTACATGAAGGCGCCATGGCAAGCCAAGTTCGAACCGGAAGGCACCAAA
ATGCGAAAATTCTGGCTGAGTGAGTCTACTGCCATTCAAGTGCCAACCATGTTCCATAAA
CAGTATTTCTGCACAACGCACGGCGATGAAATCACGGATAGCGACATTACTGTCCTAACA
CTGGAAGAGGGCGTCAGCATGCTGCTAGTGATGCCAAAACAGGCAGGAAACTTTACTCGT
TTCTATGACAACGAGCAAGGAAGTACAAGGGAAAAACTCGACAACATTGTACGATCAATA
TGGCGAGAAGAACGCCGAGGATCACGTGACATCGGACTCTGCGCAATCACGCTCCCGAAA
TTTAACATTGATCATTCGATCGACGATCTGAAGTCAGTTTTAAGCCGCATGGGTATCCAA
GATATATTCAACCGCCAATCAGCTGATCTGTCACGCTTGACTAATTCCGGTGGCCTCTAC
GTCAACGATGTACGTCACAAAACATCGTTCAACGTGGCAGAAGATGGTGTCGAGGCTGCG
GCTGCTACGTCTATAGGAATTATGACGCGATCTGCAGTTAACAACTTTAGGCCCATCAAC
AAACCGTTCATGTACTTTATACGACACGATTCCACAGGAGCATTGCTGTTTGCCGGCAAA
GTCGTAAATCCGATCGCTACATAA

InterProScan

SUPERFAMILY
Serpin_sf (IPR036186) - T[47-444] 1.44E-91
PANTHER
Serpin_fam (IPR000215) - T[57-445] 7.2E-110
Pfam
Serpin_dom (IPR023796) - T[67-444] 2.9E-94
SMART
Serpin_dom (IPR023796) - T[73-444] 9.3E-88

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPB13_HUMAN 29.024 % 177 2.25E-51
SPB10_HUMAN 28.148 % 166 8.41E-47
ILEU_HUMAN 29.843 % 158 3.56E-44