Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S34.g01331.01.t

Possible name(s)

RANBP1; RANBP2; RGPD8

Gene model

Phmamm.CG.MTP2014.S34.g01331

Location

S34 [151,320 / 155,349]

Sequences

Amino acid sequence

Length: 235

>Phmamm.CG.MTP2014.S34.g01331.01.p
MAAVETVEVHDPHYEPIISLPEQVTPTLEEDEDILFKMRAKLFRWARESDPPEWKERGTG
DVKLLKHRENSKIRLVMRRDKTYKTCANHYLDTSMELVPNCGSERAWVWTTFADFAEGEA
REELLAIRFLNSTNANEFKEKFCECQQMLKDQKAKESEIKTPTNNEEKSSKESEESSSTE
KNNDDAEKTVEITKKLENLNVESSEPDQATTSEESKNTGDAKEQTKSNVEDSPEK

Nucleotide sequence

Length: 708

>Phmamm.CG.MTP2014.S34.g01331.01.t
ATGGCTGCGGTTGAAACTGTCGAAGTACATGATCCACATTACGAACCAATTATTTCACTA
CCTGAACAAGTTACACCAACGTTGGAAGAAGATGAAGATATTTTATTCAAAATGCGAGCA
AAGTTATTTCGATGGGCCCGAGAGTCAGACCCTCCAGAATGGAAGGAAAGGGGAACTGGA
GATGTGAAGTTACTCAAGCATCGCGAAAATTCGAAAATACGACTTGTTATGAGACGTGAC
AAAACTTATAAAACCTGTGCAAACCATTACTTGGATACAAGCATGGAATTGGTACCAAAT
TGCGGGAGTGAACGAGCGTGGGTGTGGACAACATTTGCAGATTTTGCTGAAGGTGAAGCA
AGGGAGGAATTGCTAGCAATACGATTTCTTAATTCTACTAATGCCAATGAATTTAAGGAG
AAGTTTTGTGAATGCCAACAGATGTTGAAGGACCAAAAAGCAAAAGAATCAGAAATAAAA
ACTCCTACTAACAATGAAGAAAAGTCGTCCAAAGAATCGGAGGAATCATCTTCAACTGAA
AAAAATAATGATGATGCAGAAAAAACTGTTGAGATAACAAAAAAGCTTGAAAACTTAAAT
GTTGAGTCATCGGAACCTGACCAAGCAACGACTTCTGAGGAAAGCAAAAATACTGGGGAT
GCTAAAGAACAAACAAAATCCAATGTAGAAGATTCACCTGAAAAATAG

InterProScan

Gene3D	PH-like_dom_sf (IPR011993) - T[9-154] 1.8E-51
ProSiteProfiles	Ran_bind_dom (IPR000156) - T[13-151] 39.793
SMART	Ran_bind_dom (IPR000156) - T[14-145] 1.1E-48
Pfam	Ran_bind_dom (IPR000156) - T[27-147] 2.0E-45

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RBP2_HUMAN	50.649 %	147	1.32E-40
RGPD8_HUMAN	40.331 %	140	5.15E-38
RANG_HUMAN	59.551 %	211	2.22E-69