- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S351.g07663.01.t
Possible name(s)
H1F0; HIST1H1E; HIST1H1T
Gene model
Location
S351 [59,184 / 59,715]
Amino acid sequence
Length: 176
>Phmamm.CG.MTP2014.S351.g07663.01.p
MPAKVASKKPSLSHPKYAEMITASIPAIKDRKGASRQAIVSYLKKTYKVGDNVGVQVKLN
LVRMVDAGKLNRVSGTGASGRFKLVAPKPKPAAAKGADTKKTTSKPKQKKPVAKAKPVAK
KATKKPAAKKSPAKKKSAATPKQAKAAVKKASPKKKVAKKSPAKKPAAKKTKKAKK
Nucleotide sequence
Length: 531
>Phmamm.CG.MTP2014.S351.g07663.01.t
ATGCCAGCCAAGGTCGCATCAAAAAAGCCCTCTCTGTCGCACCCCAAATATGCAGAGATG
ATTACTGCTAGCATTCCCGCTATTAAAGACCGGAAAGGAGCATCACGACAAGCTATTGTC
AGTTACCTAAAGAAAACCTACAAGGTTGGCGATAATGTTGGAGTTCAAGTTAAGTTAAAC
TTAGTTCGCATGGTGGACGCCGGAAAACTAAATCGGGTCAGTGGCACTGGTGCTTCGGGA
CGATTTAAGCTAGTAGCCCCCAAGCCTAAACCTGCTGCTGCAAAAGGTGCGGACACAAAG
AAAACTACAAGCAAGCCCAAGCAGAAGAAACCTGTGGCAAAGGCGAAGCCAGTCGCCAAA
AAAGCCACCAAGAAGCCAGCCGCAAAGAAATCGCCAGCAAAAAAGAAGTCTGCCGCCACA
CCGAAACAAGCTAAGGCAGCAGTCAAGAAGGCAAGTCCCAAAAAGAAGGTTGCTAAAAAG
AGTCCAGCCAAGAAACCCGCTGCCAAGAAGACCAAAAAGGCAAAGAAGTAA
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[8-96] 6.7E-28 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[11-94] 2.34E-18 |
| SMART |
Histone_H1/H5_H15 (IPR005818) - T[11-76] 6.3E-20 |
| ProSiteProfiles |
Histone_H1/H5_H15 (IPR005818) - T[13-86] 27.023 |
| CDD |
Histone_H1/H5_H15 (IPR005818) - T[13-85] 3.61606E-18 |
| Pfam |
Histone_H1/H5_H15 (IPR005818) - T[14-84] 1.2E-22 |
| PRINTS |
Histone_H5 (IPR005819) - T[27-44] 1.3E-21 - T[47-65] 1.3E-21 - T[68-92] 1.3E-21 - T[101-115] 1.3E-21 - T[136-153] 1.3E-21 - T[158-176] 1.3E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| H10_HUMAN | 53.165 % | 87 | 9.58E-22 |