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TRANSCRIPT CARD

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  1. Clone 'cima882418' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S354.g07691.02.t

Possible name(s)

NDC1

Gene model

Phmamm.CG.MTP2014.S354.g07691

Location

S354 [26,486 / 27,408]

Sequences

Amino acid sequence

Length: 188

>Phmamm.CG.MTP2014.S354.g07691.02.p
CFNEHWLLLLLFSGFVGTVNFIANEKEQKYCLSFPLVQQTRLLYLKCNFSTIVKNATISC
TRLLRNFVMFYYFLGFVPRDLIAGFLGLKTCDYHVISVMNIFAILPILWTLLLCGTLLLV
FHDVSWNLFNLCNTKRYNFLLESVFPEDATKILTANLNGKQPPLVQMEHLEKKQHFAASD
KKADSNAQ

Nucleotide sequence

Length: 567

>Phmamm.CG.MTP2014.S354.g07691.02.t
TGCTTCAATGAGCACTGGTTGTTGCTGCTTCTGTTCAGTGGCTTTGTTGGGACTGTCAAT
TTCATAGCCAATGAAAAAGAACAAAAATATTGCTTGAGTTTTCCATTAGTTCAACAAACA
AGGCTACTGTATTTGAAATGCAACTTTTCAACAATTGTAAAGAATGCCACAATTTCATGC
ACAAGACTTCTTCGCAATTTTGTAATGTTTTATTACTTCTTGGGATTTGTGCCCAGAGAT
TTAATAGCAGGTTTTCTTGGCCTTAAAACATGTGATTACCATGTGATAAGTGTTATGAAC
ATATTTGCAATTCTACCAATCCTTTGGACATTGCTTCTTTGTGGAACTTTACTATTGGTT
TTTCATGATGTGTCTTGGAATTTATTCAACCTGTGCAACACGAAGCGATATAATTTCTTG
CTCGAGTCAGTGTTTCCAGAGGATGCAACCAAGATCCTCACTGCCAATTTGAATGGGAAA
CAGCCCCCACTTGTACAGATGGAACATTTGGAGAAAAAACAACATTTTGCAGCATCTGAC
AAAAAAGCAGATTCAAATGCACAGTAA

InterProScan

PANTHER
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[1-167] 4.3E-26
Pfam
Nucleoporin_prot_Ndc1/Nup (IPR019049) - T[1-167] 4.2E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NDC1_HUMAN 29.167 % 75.9 2.39E-16