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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S356.g07733.02.t

Possible name(s)

PLIN2; PLIN3; PLIN5

Gene model

Phmamm.CG.MTP2014.S356.g07733

Location

S356 [70,927 / 75,313]

Sequences

Amino acid sequence

Length: 398

>Phmamm.CG.MTP2014.S356.g07733.02.p
MTEISAKQRVVGFDECLLPPNENALHRVVKLPIVNSTWSFMQSYYNSMKEAYPTVTPYLE
AAETLTSTAANIALVTSKPVVDKFGPSFNDYANRGLDTLEDKVPIILKQPDEILKETKST
AGSILTSPVDNALSATERYVDYYLPSDEEDHAYDSDDSSTTCEEEELNGSKKAGDRIRDI
SNKVRRRSYKHAMKRWHGIHVRSQEALSKLNFTVDLIQYAHNGISATSATLQNSASLAND
TVHKGLETARSNWKTTTNMLNDMDGTILTHAQNLTKQLNATCATAVSYVADIPQLQHLLE
KARNAKEATEELYTMFANKTSVSQLSVSVVEAARPKMKLVEDALLQILEKLVDHPPMKWL
APDCDVDPLGGLVMEEIEAQLYGPPRDHDNGVLECCGP

Nucleotide sequence

Length: 1,197

>Phmamm.CG.MTP2014.S356.g07733.02.t
ATGACCGAAATCAGTGCGAAGCAGAGAGTTGTTGGTTTTGATGAATGTCTTTTACCACCG
AATGAAAATGCATTACACCGTGTGGTGAAGCTTCCCATAGTCAATTCGACGTGGAGTTTT
ATGCAATCATACTACAACAGTATGAAGGAAGCTTACCCAACAGTAACACCTTACTTGGAG
GCTGCTGAAACATTGACTTCTACAGCAGCGAACATTGCCTTGGTGACATCTAAGCCTGTG
GTGGACAAATTTGGGCCAAGTTTTAATGATTACGCAAATCGAGGTCTGGACACGCTTGAG
GATAAAGTACCCATTATCCTTAAACAACCAGATGAGATTTTGAAAGAAACCAAATCCACT
GCTGGCAGCATCTTGACAAGCCCAGTGGACAATGCACTGAGTGCAACTGAGAGGTATGTT
GACTACTATCTCCCGAGTGATGAAGAAGATCATGCTTATGACAGTGATGACTCAAGTACA
ACTTGTGAGGAAGAGGAGCTAAATGGAAGCAAGAAGGCTGGTGACCGTATTAGAGACATC
TCAAACAAGGTCCGTCGCCGATCATACAAGCATGCGATGAAACGTTGGCATGGAATTCAT
GTGAGAAGCCAGGAGGCTTTAAGCAAGCTCAACTTCACTGTTGATCTGATTCAATATGCC
CACAATGGTATTTCAGCAACATCTGCCACTCTTCAGAACTCTGCAAGCTTGGCAAATGAT
ACTGTACACAAAGGCCTGGAGACTGCAAGGTCAAATTGGAAAACCACAACCAACATGTTA
AATGATATGGACGGAACTATTCTAACTCATGCCCAAAACCTTACCAAGCAACTAAACGCG
ACCTGTGCAACAGCTGTTAGCTACGTAGCCGATATCCCCCAACTTCAACATCTGTTAGAG
AAGGCACGTAATGCTAAGGAAGCAACTGAGGAGCTCTACACAATGTTTGCAAACAAAACC
AGTGTCAGTCAACTTTCTGTGTCAGTTGTTGAAGCAGCAAGACCTAAGATGAAGCTGGTT
GAAGATGCTTTGCTTCAAATACTTGAAAAACTTGTTGATCATCCCCCAATGAAATGGCTG
GCTCCTGATTGTGATGTGGACCCTTTGGGTGGTCTTGTGATGGAGGAAATAGAAGCACAG
TTATATGGACCACCGCGTGACCATGATAATGGTGTGTTGGAGTGTTGTGGTCCTTAG

InterProScan

PIRSF
Perilipin (IPR004279) - T[5-125] 5.0E-28 - T[119-387] 8.7E-26
Pfam
Perilipin (IPR004279) - T[20-119] 9.4E-30 - T[118-353] 2.7E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PLIN2_HUMAN 25.459 % 122 5.33E-31