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TRANSCRIPT CARD

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  1. Clone 'cihA10E4S' > 
  2. Clone 'cien210718' > 
  3. Clone 'ma320j16' > 
  4. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3582.g17856.01.t

Possible name(s)

Phmamm.CG.MTP2014.S3582.g17856

Gene model

Phmamm.CG.MTP2014.S3582.g17856

Location

S3582 [8,797 / 11,382]

Sequences

Amino acid sequence

Length: 468

>Phmamm.CG.MTP2014.S3582.g17856.01.p
MPLRLHIGMGDCFRKLWRTKKAFKHLKLAYDEVKDDPIKGKIRNDFFEVSQHYGVCLHRL
AMHEEAKAVNQNLIEARRQLYVDEESDIVLNMAFFDIAMSLCSLERYEESLNILEKAWKC
VQNISEDIYKGGYSAYIRTKACCLAKLGKGFEAMDLVTAYFISDRMTKDSITQHSVWQHL
IRVFDQCGLYAGCIMCIKEPLECYAQLKQTKSVRKVVKHLQQQIEEFQDKIDNYSECKLD
EDAKQIIKSDFKVKIIHLSNLATSSLKHENLDEAIAYFREIETLLPKVNESPLSLLKLTS
VKFHSFVFGGISAILIGEGQHQEAVMYSKKAFNLPFQNFKRHFNDGSIDATVDLVECFVT
FGRYKEGLAAAKYGIRLCQFLCDNPFVEPKFIEIVSALADCEEMLKISFSLPFDCTPSIY
YNASERYSECYVISGGPGSTNDDIPLRDVGYDVESPADVDDSLSGNAT

Nucleotide sequence

Length: 1,407

>Phmamm.CG.MTP2014.S3582.g17856.01.t
ATGCCACTACGACTTCATATTGGAATGGGTGATTGTTTTAGAAAACTTTGGCGAACCAAA
AAAGCATTTAAACACCTAAAACTTGCATATGATGAAGTGAAAGATGATCCCATAAAAGGT
AAAATAAGGAATGACTTTTTTGAAGTTTCACAACATTATGGAGTTTGCCTACACCGCCTG
GCAATGCACGAAGAAGCTAAAGCAGTTAATCAAAACTTGATTGAAGCAAGACGCCAACTT
TATGTGGATGAAGAGTCGGATATCGTACTGAACATGGCATTTTTTGATATTGCTATGAGT
TTATGCTCTTTAGAAAGGTATGAAGAAAGTCTCAATATTCTTGAAAAGGCTTGGAAATGT
GTGCAAAACATCAGTGAAGACATTTATAAAGGAGGTTACAGCGCATACATTCGGACAAAA
GCTTGTTGTTTGGCAAAACTGGGAAAGGGTTTTGAAGCAATGGATTTGGTGACCGCCTAT
TTTATAAGTGATCGAATGACAAAAGATAGCATTACACAACACTCCGTATGGCAACATTTG
ATTAGAGTCTTTGACCAGTGTGGATTGTATGCAGGATGTATAATGTGTATCAAAGAACCA
TTAGAATGTTATGCACAGCTTAAGCAAACTAAATCTGTTCGTAAAGTGGTCAAGCACTTA
CAGCAGCAAATTGAAGAGTTTCAAGATAAAATTGACAACTACTCTGAATGTAAATTAGAT
GAAGATGCAAAACAAATTATTAAATCCGACTTTAAAGTGAAGATAATTCATCTAAGCAAT
CTTGCCACTAGCTCACTTAAACATGAGAATCTTGACGAAGCTATCGCTTATTTTAGAGAG
ATAGAAACACTCCTTCCAAAAGTTAACGAAAGCCCTTTATCGCTGTTAAAACTAACAAGT
GTCAAATTTCACAGTTTTGTGTTTGGTGGCATTTCAGCAATTCTTATTGGGGAGGGGCAA
CATCAAGAAGCAGTTATGTACTCCAAAAAGGCTTTTAATTTGCCATTTCAGAATTTTAAG
CGACATTTTAATGATGGAAGCATTGATGCAACAGTAGATCTGGTTGAATGTTTTGTTACT
TTTGGACGTTACAAAGAAGGACTTGCAGCAGCAAAATATGGCATCAGATTGTGTCAATTT
TTGTGTGACAATCCTTTTGTGGAACCAAAGTTTATCGAAATTGTTTCAGCATTAGCAGAC
TGTGAAGAAATGTTAAAAATTTCTTTTTCTTTACCTTTCGATTGCACACCATCTATATAT
TACAATGCATCTGAGCGCTATTCAGAGTGTTACGTCATCTCCGGCGGTCCCGGCTCCACG
AACGACGATATTCCCCTTCGTGACGTCGGTTATGACGTGGAGAGTCCGGCCGATGTCGAC
GACTCCTTGTCGGGGAACGCGACCTAG

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[3-176] 4.5E-8 - T[196-434] 2.4E-7
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[6-375] 2.49E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value