Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S360.g07775.01.t

Possible name(s)

RPAP2

Gene model

Phmamm.CG.MTP2014.S360.g07775

Location

S360 [55,673 / 60,108]

Sequences

Amino acid sequence

Length: 424

>Phmamm.CG.MTP2014.S360.g07775.01.p
MSQSDKTKKQSDDAKRKVLAEKRAYEIVKMLLETNISKDFFANSVLYISNQHYEDVNEER
SILKLCGYPLCDNPLVNVPKQRYKISGNKVYDLTDRKKFCSNSCFKASEYVKQQILTSPL
WLRSHKNMQPIHLDQSKTGLKGNEIPIMHTMSASDIDLTEDNHPDLDTLPPNSFDESMEK
NPYNNPEDLQTKPTKIKHQANASARNISPSKLLLQHILMTIKEWLGKESVLYLKGIHVTQ
KQIEDPSLLTSDEKRIEEKMKLLDDRIMQINMGQTSVAPAKVNVSQKSDETAVYCEQVDR
FFRGQIEDRPKVTFKDIPKHKEGDSAKQIGKIELPNLDMKDQMVIRRRILHKNLSKIMHD
LVPNISNGVLSQTLKGLISTFRLSGNNIEIEVGMKQSQGVIEALVTSLRLDLNIIKGFTE
EILR

Nucleotide sequence

Length: 1,275

>Phmamm.CG.MTP2014.S360.g07775.01.t
ATGTCACAATCCGACAAAACGAAAAAACAATCCGATGACGCAAAACGGAAAGTTTTAGCC
GAAAAACGTGCTTACGAAATTGTCAAAATGTTGTTGGAGACAAATATTTCAAAGGATTTT
TTCGCAAACTCAGTGTTGTACATAAGTAACCAGCACTATGAGGATGTAAATGAAGAAAGG
TCAATTCTAAAGTTGTGTGGATATCCCCTTTGTGACAATCCTCTTGTCAATGTACCAAAA
CAGCGGTACAAAATATCTGGGAACAAAGTTTATGATTTAACTGATCGAAAGAAATTCTGC
AGTAACTCATGCTTCAAAGCTTCAGAATACGTAAAGCAGCAAATTTTAACTTCACCTCTG
TGGCTTCGAAGTCACAAAAACATGCAACCAATCCACCTTGACCAAAGTAAAACTGGATTA
AAGGGAAACGAAATTCCTATTATGCATACTATGTCTGCGAGTGATATTGATTTAACAGAG
GACAATCATCCAGATCTAGATACTCTACCACCAAACAGTTTTGATGAGAGCATGGAAAAG
AACCCATATAATAATCCAGAGGATTTGCAAACCAAACCAACTAAAATTAAACACCAAGCC
AATGCCTCTGCAAGGAATATTTCTCCATCAAAGCTACTTTTGCAGCATATATTAATGACA
ATAAAAGAGTGGCTGGGAAAAGAATCTGTTTTGTATTTAAAGGGTATACATGTTACACAA
AAACAAATTGAAGATCCTTCTCTACTTACAAGTGATGAAAAGAGAATTGAAGAAAAAATG
AAGCTACTTGATGACCGAATTATGCAAATCAATATGGGACAAACCTCTGTTGCTCCCGCA
AAAGTTAATGTTTCTCAAAAAAGTGATGAAACTGCTGTGTATTGTGAACAAGTTGATCGC
TTTTTTCGTGGTCAAATTGAAGATAGGCCCAAAGTGACCTTCAAAGACATACCAAAACAC
AAGGAAGGTGATTCAGCAAAACAAATTGGAAAAATTGAACTTCCCAACTTGGATATGAAA
GATCAAATGGTTATTCGCAGAAGAATACTTCATAAAAATCTCAGCAAAATAATGCATGAT
CTTGTTCCAAATATATCAAACGGAGTTCTGTCACAAACACTCAAGGGCCTCATATCCACC
TTTAGATTGAGCGGGAATAACATAGAGATCGAAGTTGGTATGAAACAATCGCAAGGGGTT
ATCGAGGCTTTGGTTACGTCTCTTCGTCTTGACCTCAACATCATCAAAGGGTTTACTGAG
GAAATTCTGCGCTAA

InterProScan

Gene3D	Rtr1/RPAP2_sf (IPR038534) - T[3-158] 8.1E-34
ProSiteProfiles	Rtr1/RPAP2 (IPR007308) - T[43-124] 23.751
Pfam	Rtr1/RPAP2 (IPR007308) - T[47-115] 4.3E-20

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RPAP2_HUMAN	42.771 %	135	1.44E-34