Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cicl026b23' > 
  2. Transcript 'KH2012:KH.C3.61.v1.A...' > 
  3. Clone 'cima032b11' > 
  4. Transcript 'KH2012:KH.C2.14.v5.A...' > 
  5. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S366.g07867.01.t

Possible name(s)

Phmamm.CG.MTP2014.S366.g07867

Gene model

Phmamm.CG.MTP2014.S366.g07867

Location

S366 [54,565 / 58,413]

Sequences

Amino acid sequence

Length: 1,043

>Phmamm.CG.MTP2014.S366.g07867.01.p
MPLLQKKKTPEEDKIAKFEHAEKIESLQLQVADQYKGIMGDIMNYCVSVMGNPPCKYALV
GMGSLARKEITPYSDFENIVILEDGIEKQNNYEEILEYFRWVATLFQIMLVNFRETVVRF
MAIPGLKWYYDMHTPCGISPDGLAQSACKNSIGRQEFSRERPWKTELIKPVAEMLKYLKP
EEDQNNGFHLAEMLSVTCFVSGDHHLHQIFQEKAKEKFEFEDSGQCREEIMSQVVEFNTF
YSMIYEEWKMHMDLKRIAYRSITIFMSALGRYYKISTPSCFDIARNLPDMSEHIRQQMLL
AISTACEIRLRAYTESYAQNDMVAFKIISQGYDALSEMPQGKVTKKLIELVGRESYFCCF
KCAFYLQSVVARVFHLNFKNEFGVLNALQFKEEHFDKPGFELYVKYHVGLFSEILKVHKY
MNPDTDFTLPEHEIIARASLTLQNPETALKHFQLAVNSQELDKTSMHCASFHLHVAICVM
KQENYKEGLKSCQKTDTLIKNYTSLGNPQHSNTISLSYCTHFLMATCHFYLENITEAIEH
FLFCSTLSFPKSFVHIFRAPVFAALAQCAFAQGDIPACLKWCKKEMTERMLLTTDETKDP
DIANCRAIQGLCHLGQGNTDKGLEDYATAQATFEAANHPKWNKKAAYLELSQHWLKLVNM
QSEDVENLRQIFDSIDSTFVRYDNKDDFTAAPNSEQSKTAKGLNLEFEMLPDKFSSLPKN
MGGEETPASMMNLAYTQMQSEHYIQAMAYFKIAQLLWRFLETPVHKRNNTECYRNIAECF
MRLHCYEGAVKNFLQELQCLQLNNEGQKSNTELVEVLNNIEKCYLVLNNKEQALQYSKLR
DDIVTKMEVTEKKSSKAIAFKKEGRQFVDKNNFEEALKQFEQELSVLETMGSDANTEDSI
AECLFWTALCYFKLQVYHQAMSLLQQARDIWETKPTKDYTKKIIKCLKWLGKSQYEMENL
QQAFTFFQSEFDLRNQENKNVHRDPHIALCHYNIALCYEKCYDNNEAASHFKLAQITWEN
IENPRWATNIAECETAIARLFTQ

Nucleotide sequence

Length: 3,132

>Phmamm.CG.MTP2014.S366.g07867.01.t
ATGCCCTTGCTACAAAAGAAAAAAACACCTGAAGAAGACAAAATAGCAAAATTTGAACAT
GCAGAAAAAATTGAAAGCCTTCAATTACAAGTAGCTGATCAATACAAAGGCATCATGGGA
GACATAATGAACTATTGTGTATCTGTTATGGGGAATCCCCCTTGTAAATATGCTTTGGTG
GGAATGGGATCTTTAGCCAGAAAAGAAATTACTCCCTACTCAGATTTTGAAAACATTGTT
ATCTTAGAAGATGGAATCGAGAAGCAGAATAACTATGAAGAGATACTTGAATACTTTAGA
TGGGTTGCTACATTGTTTCAGATTATGTTAGTTAACTTTAGGGAAACTGTTGTTCGCTTT
ATGGCTATACCAGGTTTAAAATGGTACTATGACATGCATACACCATGTGGAATTTCACCA
GACGGATTGGCCCAAAGTGCCTGTAAGAATTCAATTGGGAGACAAGAGTTTAGTCGAGAG
AGACCGTGGAAAACTGAACTGATTAAACCAGTTGCTGAGATGCTTAAATACCTCAAGCCA
GAAGAAGACCAAAATAATGGGTTTCACCTTGCTGAAATGCTCTCAGTAACCTGCTTTGTG
TCTGGAGACCATCACCTCCATCAAATCTTCCAGGAGAAAGCCAAGGAGAAGTTTGAATTT
GAAGATTCAGGACAGTGTCGTGAAGAAATCATGAGTCAAGTTGTAGAGTTTAACACATTT
TATAGCATGATTTATGAAGAGTGGAAAATGCATATGGACCTCAAGCGCATTGCTTACCGA
AGTATTACCATATTTATGTCTGCGTTGGGAAGATATTACAAAATCTCAACACCATCGTGC
TTCGACATTGCCCGAAACCTACCAGATATGTCAGAACATATAAGACAACAGATGCTGCTT
GCCATTTCGACGGCATGTGAAATAAGGCTTAGAGCCTACACAGAGTCTTATGCACAAAAT
GATATGGTGGCGTTCAAAATTATATCCCAAGGGTATGATGCTCTCAGTGAAATGCCACAG
GGAAAAGTTACCAAGAAATTGATTGAACTTGTTGGTAGGGAATCTTACTTCTGTTGTTTC
AAATGTGCTTTCTATCTCCAGTCAGTGGTAGCAAGGGTCTTTCATCTCAACTTTAAAAAT
GAATTTGGTGTGCTCAATGCTCTGCAATTTAAAGAGGAACACTTTGATAAACCAGGATTT
GAACTTTATGTAAAATATCATGTTGGATTATTCAGTGAAATACTTAAGGTTCACAAATAC
ATGAATCCAGATACAGATTTTACCTTGCCAGAACATGAAATTATTGCGAGGGCAAGTTTG
ACACTTCAGAATCCTGAGACAGCACTCAAACATTTCCAGTTGGCAGTAAATTCACAGGAG
TTAGACAAAACATCCATGCACTGTGCATCCTTCCACCTGCACGTTGCCATATGTGTTATG
AAGCAAGAAAATTACAAAGAAGGACTAAAAAGCTGCCAAAAAACAGATACACTCATTAAA
AACTACACCAGTTTAGGAAATCCTCAGCACTCTAACACAATAAGTCTATCGTACTGTACA
CATTTTTTGATGGCCACCTGTCATTTTTACCTGGAAAACATAACTGAAGCCATTGAACAC
TTTTTGTTTTGTAGCACCTTGTCATTCCCGAAAAGCTTTGTTCACATCTTTCGGGCACCT
GTTTTTGCTGCTCTTGCACAGTGTGCGTTTGCACAGGGAGATATACCTGCGTGTTTAAAG
TGGTGCAAAAAAGAAATGACAGAGCGAATGCTGTTAACTACAGATGAAACTAAAGACCCT
GACATAGCAAATTGTCGAGCAATCCAGGGTTTATGCCATCTTGGGCAGGGCAACACAGAT
AAAGGTTTGGAAGATTATGCCACTGCTCAAGCAACTTTTGAAGCTGCAAACCACCCGAAG
TGGAATAAAAAAGCAGCGTACTTGGAATTATCCCAACACTGGCTAAAGCTGGTGAACATG
CAAAGCGAAGATGTGGAAAATTTGCGGCAAATTTTTGACTCAATCGATTCCACTTTTGTA
AGATACGACAACAAAGATGATTTTACAGCAGCACCGAATTCGGAGCAAAGCAAAACAGCA
AAAGGCTTAAATCTTGAGTTTGAAATGCTTCCTGATAAGTTTAGTTCACTACCAAAGAAC
ATGGGTGGAGAGGAGACTCCTGCAAGTATGATGAATCTTGCATACACCCAAATGCAAAGT
GAGCACTACATTCAAGCAATGGCTTACTTCAAAATTGCCCAATTGTTATGGAGGTTTTTG
GAGACACCAGTCCATAAAAGAAACAACACTGAATGCTATAGAAACATTGCTGAGTGTTTT
ATGAGACTGCACTGTTATGAAGGGGCTGTCAAAAACTTTTTGCAGGAATTGCAATGCTTG
CAACTTAATAACGAAGGTCAAAAAAGTAATACAGAGCTCGTTGAAGTTTTAAACAACATT
GAAAAGTGCTATTTAGTATTAAACAACAAGGAACAAGCCTTGCAGTATTCTAAACTTCGA
GATGACATTGTTACAAAAATGGAAGTCACAGAAAAGAAATCGTCAAAAGCCATTGCATTT
AAAAAGGAAGGCAGGCAATTCGTGGACAAAAACAATTTTGAGGAGGCCTTAAAACAGTTT
GAGCAGGAACTATCAGTCCTTGAAACAATGGGCAGTGATGCCAATACAGAGGATTCAATT
GCCGAATGCCTTTTCTGGACAGCTTTGTGTTATTTTAAACTACAAGTTTACCACCAAGCA
ATGAGCTTGTTACAACAGGCAAGAGATATTTGGGAAACAAAACCCACCAAAGACTACACA
AAGAAAATAATAAAGTGCTTAAAATGGCTCGGAAAATCTCAATACGAAATGGAGAATTTA
CAACAAGCTTTTACGTTTTTTCAATCGGAATTTGACTTAAGAAACCAAGAAAACAAAAAC
GTTCATAGAGATCCACATATTGCCCTTTGTCACTATAACATTGCCCTTTGTTATGAGAAG
TGTTACGACAACAATGAAGCTGCAAGTCACTTTAAACTCGCTCAAATAACGTGGGAAAAC
ATTGAAAACCCGAGATGGGCAACAAACATTGCAGAGTGTGAAACTGCAATTGCTCGGTTA
TTTACACAATAA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[20-108] 2.4E-8
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[429-674] 8.3E-13 - T[724-841] 1.1E-9 - T[842-1037] 5.7E-21
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[434-629] 1.06E-10 - T[728-928] 5.06E-10 - T[857-1014] 4.03E-15
SMART
TPR_repeat (IPR019734) - T[469-502] 110.0 - T[518-552] 290.0 - T[603-636] 72.0 - T[727-760] 100.0 - T[770-803] 37.0 - T[857-890] 58.0 - T[901-934] 100.0 - T[988-1021] 21.0
ProSiteProfiles
TPR_repeat (IPR019734) - T[770-803] 5.222 - T[857-890] 8.26 - T[901-934] 5.369 - T[944-977] 5.723

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value