- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S36.g01413.01.t
Possible name(s)
NKX6-1; NKX6-2; NKX6-3
Gene model
Location
S36 [134,087 / 136,470]
Amino acid sequence
Length: 310
>Phmamm.CG.MTP2014.S36.g01413.01.p
MDGLNINPLNPTGAPSTIVMEKYGRKKHTRPTFSGQQIFALEKTFEQSKYLAGPERARLA
YSLAMTESQVKVWFQNRRTKWRKRHAAEMASAKKRQDVEVTQKMKEMDSAQLQTSPSQKC
DESSNNIATSLESPEYDNGVDNYSESHSSGGSYTASKRGTDNEASDNSEVDDNDDKPLQP
NRPSSQEVATEQPQETERERQFKSLLYGGHKLRNELTAGNHPASSMYSTQFSAVCSGDAH
AATLPPFNVGMLSSSKVTPGGSQTWTGPQENAFTSSSSSSPMGLSMDSLFPGYVTSIPNG
VTNDAIVQKF
Nucleotide sequence
Length: 933
>Phmamm.CG.MTP2014.S36.g01413.01.t
ATGGATGGCTTAAACATAAATCCATTGAACCCGACAGGTGCTCCCTCCACCATCGTAATG
GAAAAGTATGGACGCAAAAAGCACACGCGACCCACCTTTTCCGGACAGCAGATTTTCGCC
CTGGAAAAGACCTTCGAGCAGAGCAAATACCTGGCGGGACCCGAACGGGCGCGACTTGCC
TACTCTCTTGCAATGACAGAATCACAAGTCAAGGTGTGGTTCCAAAACCGACGAACAAAA
TGGCGTAAGCGTCACGCGGCCGAAATGGCGTCAGCCAAGAAGCGACAAGACGTCGAAGTT
ACGCAGAAGATGAAGGAGATGGACAGCGCCCAGTTGCAAACTTCTCCCTCACAAAAATGT
GACGAATCATCCAACAACATCGCGACATCACTGGAAAGTCCCGAGTATGACAACGGCGTC
GACAACTACTCGGAGTCACACTCAAGCGGAGGATCTTACACAGCATCGAAACGAGGCACC
GATAATGAGGCGAGCGATAACAGCGAGGTGGACGACAACGACGATAAACCGCTTCAACCA
AATCGCCCGTCCTCACAAGAAGTCGCTACTGAGCAGCCGCAAGAAACTGAGCGGGAGCGA
CAGTTCAAATCCCTGCTCTACGGTGGCCACAAGTTGCGTAATGAACTTACCGCCGGCAAC
CACCCAGCAAGCAGTATGTACTCCACACAGTTTTCAGCTGTGTGTTCTGGGGATGCCCAC
GCGGCCACTCTTCCTCCGTTTAACGTAGGAATGTTGTCAAGTAGCAAAGTTACACCTGGG
GGGTCGCAAACGTGGACTGGACCCCAGGAAAACGCTTTTACATCATCATCATCATCATCG
CCCATGGGCCTTTCCATGGACTCACTTTTTCCCGGCTATGTCACCTCCATACCGAACGGT
GTAACCAATGACGCGATTGTGCAGAAGTTTTAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[12-84] 2.69E-22 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[24-84] 19.629 |
| SMART |
Homeobox_dom (IPR001356) - T[26-88] 2.1E-21 |
| Pfam |
Homeobox_dom (IPR001356) - T[27-83] 2.7E-20 |
| CDD |
Homeobox_dom (IPR001356) - T[27-85] 1.25738E-19 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[48-59] 9.5E-6 - T[63-73] 9.5E-6 - T[73-82] 9.5E-6 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[59-82] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX62_HUMAN | 80.435 % | 157 | 1.9E-46 |
| NKX61_HUMAN | 80.899 % | 158 | 7.16E-46 |
| NKX63_HUMAN | 83.824 % | 125 | 1.96E-34 |