Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S36.g01421.01.t

Possible name(s)

KIN; SUPT5H

Gene model

Phmamm.CG.MTP2014.S36.g01421

Location

S36 [210,129 / 213,543]

Sequences

Amino acid sequence

Length: 426

>Phmamm.CG.MTP2014.S36.g01421.01.p
MGKEKPGFMTAKAIGNRIKSKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQLLLAG
EKPGAFNNFFSDEFFKDFMQTLKTSFGTKRVQNNVVYNEYISHKEHIHMNATRWYTLTAF
TKWLGREGHCKVDETEKGWFIQYIDRDPRVLARQKELEKQKARERDDEERHAKYTSCIAC
FAIKLNIWIYKVSAYIEYVWCSDGTSTRVIEEMVKRGQEAEASSSSREFTELKRDDEDEK
VAFNLTAPTIPETKVSSDGKNSFKKMNQLGSKRKQAGTLEKSVKKKKSALDEIMTAEEVK
KKVSQRTENWLTPETVVKVTTKRLGEKYYKKKAVVKEVNNKFTAVVKMLDSGDKIKLDQM
HVETVIPALGRKVIVVNGGYRNAVAIMESVDIKKFSATIKIVEGPLSGRIVENVKYEDIS
KKHEAT

Nucleotide sequence

Length: 1,281

>Phmamm.CG.MTP2014.S36.g01421.01.t
ATGGGAAAGGAAAAACCAGGGTTTATGACAGCTAAAGCCATTGGAAATCGGATCAAATCA
AAAGGTCTCCAAAAACTACGATGGTATTGTCAAATGTGTCAAAAGCAGTGTCGCGATGAG
AATGGATTTAAATGTCATTGCATGTCAGAATCGCACCAGAGACAGCTTCTCTTGGCTGGT
GAAAAACCTGGAGCATTTAATAACTTCTTTTCTGATGAATTTTTCAAAGACTTCATGCAG
ACACTGAAAACGTCCTTTGGCACAAAGAGAGTGCAGAACAATGTGGTGTATAATGAGTAC
ATCAGTCATAAAGAACACATTCACATGAATGCCACCCGCTGGTATACATTAACAGCATTC
ACAAAGTGGCTTGGAAGGGAAGGGCATTGCAAGGTGGATGAAACAGAAAAAGGTTGGTTT
ATTCAATACATCGATCGGGATCCAAGGGTTTTAGCAAGACAGAAAGAGCTGGAAAAACAG
AAAGCCAGGGAACGGGATGATGAAGAACGACATGCAAAGTACACAAGTTGTATTGCTTGT
TTTGCTATCAAACTTAACATTTGGATTTATAAAGTTTCTGCATACATTGAATATGTGTGG
TGTAGTGATGGGACGAGTACCCGGGTTATTGAAGAAATGGTAAAACGAGGTCAAGAGGCA
GAAGCAAGTTCAAGTTCAAGGGAATTTACTGAACTCAAACGAGATGATGAAGATGAAAAA
GTTGCCTTTAATCTAACTGCACCGACTATACCAGAAACAAAGGTATCTTCAGATGGTAAA
AATAGTTTCAAAAAGATGAACCAGTTGGGATCAAAACGAAAGCAAGCTGGGACTTTAGAG
AAGTCAGTAAAAAAGAAAAAGTCTGCATTGGATGAAATCATGACAGCGGAGGAAGTGAAG
AAAAAGGTTTCACAAAGAACAGAGAACTGGCTTACCCCTGAAACTGTAGTTAAAGTCACT
ACAAAGCGATTGGGTGAAAAATACTACAAAAAGAAAGCAGTAGTAAAGGAAGTTAACAAC
AAATTCACTGCAGTGGTGAAAATGTTGGACAGTGGTGATAAAATCAAATTGGATCAAATG
CATGTGGAGACAGTTATCCCTGCTCTAGGAAGAAAAGTTATTGTAGTAAATGGTGGTTAT
AGGAATGCTGTGGCCATAATGGAGTCAGTGGACATCAAGAAATTTAGTGCCACCATAAAA
ATTGTGGAGGGACCTTTAAGCGGAAGGATTGTGGAAAATGTGAAATATGAAGACATTTCT
AAGAAACATGAAGCTACCTGA

InterProScan

PANTHER	KIN17-like (IPR037321) - T[1-174] 1.1E-150 - T[206-421] 1.1E-150
SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[28-62] 8.93E-6
SMART	DNA/RNA-bd_Kin17_cons_domain (IPR019447) - T[54-173] 2.5E-73
Pfam	DNA/RNA-bd_Kin17_cons_domain (IPR019447) - T[54-173] 1.5E-45
Gene3D	KIN17_WH-like_sf (IPR038254) - T[62-162] 2.4E-42
Gene3D	Rib_L2_dom2 (IPR014722) - T[367-422] 5.1E-22

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
KIN17_HUMAN	57.512 %	443	6.03E-155