Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S36.g01429.01.t

Possible name(s)

KIAA0141; SEL1L; SEL1L2

Gene model

Phmamm.CG.MTP2014.S36.g01429

Location

S36 [281,472 / 284,129]

Sequences

Amino acid sequence

Length: 442

>Phmamm.CG.MTP2014.S36.g01429.01.p
MYKILKGLIRYRARPPAPSTQTSKTDETEISNSAKEDEIHNVFQINCYDGRSGLLIDNQS
REWHNNRKFSYDGDVNFRCRYWKDLVLGSATVWAVARYINDIHHINKPKSSYCIWKVLKE
KSIKERLHQLYSSVTALPQLTVNNVLPRIPAITLPSHMVHAAGVQEDATSGSVLDIQVPK
GNLKDAAHVLKNKKSVTIDPKFISNDPKFISDGQSSGVSSSRDRHLSTSSSTGVSDEDVE
EFVSSTKRCIGLTYNIQGLNLYKSGKFEQAVESFSNGSIEGCSQAQYNLGLCFERGKGTD
MDIEKAKKEYRKAASQGHKWAQYNLALILFDDNNAVQTAHGLYLLEEAAKQGMAEAQSLL
GAKLAQPGLHNNMKKAVEMFKMASEQQDMLSTYHLAECQEHGLGGLATNPLQAYELYTTA
AAMGHLDSKYKMALILAKGCDG

Nucleotide sequence

Length: 1,478

>Phmamm.CG.MTP2014.S36.g01429.01.t
CTCGATTCTCAAATACCCAATCTCAATAAATGTGAAGTGGAATGTCTCTCTGCAGTTTGC
ACTGCAAAATTGCATAGGGTATCTTGCTTTTTGTGCTTTAGCAGTGCCACAAACCAATAG
CATTTTATTACTGCAGCCCGAAATTGTGAAAGATGTACAAAATCCTCAAAGGACTGATAA
GATATCGTGCAAGGCCCCCAGCCCCATCAACCCAAACTTCTAAAACTGATGAAACAGAAA
TTTCTAACTCTGCTAAGGAAGATGAAATTCACAATGTCTTTCAAATCAATTGTTATGATG
GAAGATCTGGTCTTCTAATTGATAACCAATCAAGGGAGTGGCACAATAATCGCAAGTTTT
CTTATGATGGAGATGTTAACTTTCGCTGTAGATATTGGAAAGATCTGGTATTGGGTTCTG
CTACAGTGTGGGCTGTTGCACGTTACATCAATGATATACATCACATAAACAAACCAAAAT
CTTCCTATTGCATTTGGAAAGTTTTGAAAGAAAAATCCATCAAAGAGAGACTACATCAAC
TTTATTCGTCTGTTACTGCCTTGCCCCAATTGACTGTCAATAATGTTTTGCCAAGAATTC
CAGCTATTACACTTCCAAGTCACATGGTTCATGCTGCTGGGGTTCAGGAAGATGCCACTT
CTGGATCAGTTCTTGACATTCAAGTGCCCAAAGGCAACTTGAAAGATGCAGCTCATGTAC
TGAAAAACAAAAAATCTGTAACAATTGATCCCAAGTTCATCAGCAATGATCCTAAGTTCA
TCAGTGATGGACAATCATCTGGTGTATCAAGTAGTAGAGACAGACATCTCTCTACTTCTT
CTTCCACTGGCGTGTCTGATGAGGATGTTGAAGAGTTTGTGTCCTCCACAAAACGCTGCA
TAGGCCTTACATACAACATTCAAGGGTTAAATCTGTATAAGTCAGGCAAGTTTGAGCAAG
CAGTTGAGAGCTTTTCTAATGGCAGCATTGAGGGATGTTCTCAGGCCCAATATAACCTTG
GACTTTGTTTTGAAAGAGGAAAAGGGACAGACATGGATATTGAAAAGGCAAAGAAGGAAT
ATCGAAAGGCAGCCTCACAAGGTCATAAGTGGGCACAGTATAATCTGGCCTTGATTCTGT
TTGATGACAATAATGCGGTCCAGACTGCCCATGGTTTATACCTTCTTGAAGAAGCAGCTA
AACAGGGAATGGCCGAGGCACAGTCCCTTCTTGGAGCAAAACTTGCACAACCAGGCTTGC
ACAACAACATGAAAAAGGCTGTTGAGATGTTTAAGATGGCATCAGAACAACAGGACATGC
TGTCTACATACCATCTAGCGGAGTGTCAGGAACATGGTCTGGGTGGTTTAGCAACTAATC
CTTTACAAGCATATGAACTGTACACTACTGCAGCAGCCATGGGCCACCTTGACTCCAAAT
ATAAGATGGCTCTCATACTTGCCAAAGGTTGTGATGGT

InterProScan

Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[253-442] 1.2E-35
SMART	Sel1-like (IPR006597) - T[283-318] 6.2E-9 - T[319-353] 290.0 - T[354-388] 0.45 - T[389-425] 0.0026
Pfam	Sel1-like (IPR006597) - T[283-318] 9.3E-6 - T[321-352] 17.0 - T[371-387] 53.0 - T[392-425] 1.6E-4

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DELE_HUMAN	34.234 %	107	4.65E-25