Aniseed - Transcript Card

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S36.g01429.02.t

Possible name(s)

KIAA0141; SEL1L; SEL1L2

Gene model

Phmamm.CG.MTP2014.S36.g01429

Location

S36 [281,624 / 284,135]

Sequences

Amino acid sequence

Length: 443

>Phmamm.CG.MTP2014.S36.g01429.02.p
MYKILKGLIRYRARPPAPSTQTSKTDETEISNSAKEDEIHNVFQINCYDGRSGLLIDNQS
REWHNNRKFSYDGDVNFRCRYWKDLVLGSATVWAVARYINDIHHINKPKSSYCIWKVLKE
KSIKERLHQLYSSVTALPQLTVNNVLPRIPAITLPSHMVHAAGVQEDATSGSVLDIQVPK
GNLKDAAHVLKNKKSVTIDPKFISNDPKFISDGQSSGVSSSRDRHLSTSSSTGVSDEDVE
EFVSSTKRCIGLTYNIQGLNLYKSGKFEQAVESFSNGSIEGCSQAQYNLGLCFERGKGTD
MDIEKAKKEYRKAASQGHKWAQYNLALILFDDNNAVQTAHGLYLLEEAAKQGMAEAQSLL
GAKLAQPGLHNNMKKAVEMFKMASEQQDMLSTYHLAECQEHGLGGLATNPLQAYELYTTA
AAMGHLDSKYKMALILAKGCDGK

Nucleotide sequence

Length: 1,332

>Phmamm.CG.MTP2014.S36.g01429.02.t
ATGTACAAAATCCTCAAAGGACTGATAAGATATCGTGCAAGGCCCCCAGCCCCATCAACC
CAAACTTCTAAAACTGATGAAACAGAAATTTCTAACTCTGCTAAGGAAGATGAAATTCAC
AATGTCTTTCAAATCAATTGTTATGATGGAAGATCTGGTCTTCTAATTGATAACCAATCA
AGGGAGTGGCACAATAATCGCAAGTTTTCTTATGATGGAGATGTTAACTTTCGCTGTAGA
TATTGGAAAGATCTGGTATTGGGTTCTGCTACAGTGTGGGCTGTTGCACGTTACATCAAT
GATATACATCACATAAACAAACCAAAATCTTCCTATTGCATTTGGAAAGTTTTGAAAGAA
AAATCCATCAAAGAGAGACTACATCAACTTTATTCGTCTGTTACTGCCTTGCCCCAATTG
ACTGTCAATAATGTTTTGCCAAGAATTCCAGCTATTACACTTCCAAGTCACATGGTTCAT
GCTGCTGGGGTTCAGGAAGATGCCACTTCTGGATCAGTTCTTGACATTCAAGTGCCCAAA
GGCAACTTGAAAGATGCAGCTCATGTACTGAAAAACAAAAAATCTGTAACAATTGATCCC
AAGTTCATCAGCAATGATCCTAAGTTCATCAGTGATGGACAATCATCTGGTGTATCAAGT
AGTAGAGACAGACATCTCTCTACTTCTTCTTCCACTGGCGTGTCTGATGAGGATGTTGAA
GAGTTTGTGTCCTCCACAAAACGCTGCATAGGCCTTACATACAACATTCAAGGGTTAAAT
CTGTATAAGTCAGGCAAGTTTGAGCAAGCAGTTGAGAGCTTTTCTAATGGCAGCATTGAG
GGATGTTCTCAGGCCCAATATAACCTTGGACTTTGTTTTGAAAGAGGAAAAGGGACAGAC
ATGGATATTGAAAAGGCAAAGAAGGAATATCGAAAGGCAGCCTCACAAGGTCATAAGTGG
GCACAGTATAATCTGGCCTTGATTCTGTTTGATGACAATAATGCGGTCCAGACTGCCCAT
GGTTTATACCTTCTTGAAGAAGCAGCTAAACAGGGAATGGCCGAGGCACAGTCCCTTCTT
GGAGCAAAACTTGCACAACCAGGCTTGCACAACAACATGAAAAAGGCTGTTGAGATGTTT
AAGATGGCATCAGAACAACAGGACATGCTGTCTACATACCATCTAGCGGAGTGTCAGGAA
CATGGTCTGGGTGGTTTAGCAACTAATCCTTTACAAGCATATGAACTGTACACTACTGCA
GCAGCCATGGGCCACCTTGACTCCAAATATAAGATGGCTCTCATACTTGCCAAAGGTTGT
GATGGTAAGTAA

InterProScan

Gene3D	TPR-like_helical_dom_sf (IPR011990) - T[253-443] 1.3E-35
Pfam	Sel1-like (IPR006597) - T[283-318] 9.4E-6 - T[321-352] 16.0 - T[371-387] 53.0 - T[392-425] 1.7E-4
SMART	Sel1-like (IPR006597) - T[283-318] 6.2E-9 - T[319-353] 290.0 - T[354-388] 0.45 - T[389-425] 0.0026

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DELE_HUMAN	34.234 %	107	5.68E-25