- Transcript 'KH2012:KH.C9.701.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S371.g07922.02.t
Possible name(s)
ZNF28; ZNF454; ZNF77
Gene model
Location
S371 [60,087 / 60,930]
Amino acid sequence
Length: 280
>Phmamm.CG.MTP2014.S371.g07922.02.p
MVQQANNSNTLEDVGCNDTQSDVDDTDYKSSTNNSEGDSDDTVCIEKLNKDTFEGPNGVS
CNTPIAKPKLRRKTKVYDDSYRCNQCNKNYSSRHSLKGHLRRKHLNTESLKRCNFCEKTF
YCKFALEGHTNGHLGLKPNRCKFCEKSFVSKSNLQSHITTIHNRDKPHNCDVCGKAFAYQ
SILEKHMRIHTGDNPYPCPHCDKKFNHSSHRNRHVRKIHQGVDFNTYKCHMCEKAFRDNN
KLNVHVQCVHLKLKPHACNVCQRRFGTPSSLRSHEKTHRR
Nucleotide sequence
Length: 843
>Phmamm.CG.MTP2014.S371.g07922.02.t
ATGGTTCAACAAGCTAACAACTCCAACACACTTGAAGATGTTGGTTGCAATGATACACAG
TCTGATGTTGATGATACTGATTACAAGTCAAGTACAAATAATTCAGAAGGTGACTCTGAT
GACACTGTGTGTATTGAAAAACTCAACAAAGACACATTTGAGGGACCCAATGGAGTAAGT
TGTAACACTCCAATCGCTAAGCCCAAATTGAGAAGAAAAACGAAGGTTTATGATGATAGT
TATCGATGTAACCAATGCAACAAAAACTACAGCAGTAGGCACAGTCTAAAAGGCCATCTG
AGGAGAAAACACTTAAACACTGAGAGTTTAAAACGCTGCAACTTTTGTGAAAAGACCTTT
TACTGTAAATTTGCCTTGGAGGGCCACACAAACGGGCATCTGGGCTTAAAACCCAACCGT
TGCAAGTTCTGCGAGAAATCGTTCGTGTCAAAATCAAATCTTCAGTCACACATAACCACA
ATTCACAACAGGGATAAACCGCATAATTGTGATGTTTGCGGCAAAGCGTTCGCGTATCAA
TCTATTTTAGAGAAACACATGCGCATACACACTGGGGATAACCCTTATCCCTGCCCCCAC
TGTGACAAAAAGTTCAACCATTCGTCTCACCGCAACAGGCACGTACGAAAAATCCATCAA
GGCGTTGATTTTAACACTTACAAATGCCACATGTGCGAAAAGGCTTTCCGCGACAATAAT
AAATTGAACGTACATGTACAGTGTGTACATTTAAAATTGAAGCCGCATGCCTGTAACGTT
TGCCAACGGAGGTTTGGCACTCCAAGCAGTCTTAGATCGCACGAAAAGACCCACCGACGG
TAG
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[76-120] 8.96E-6 - T[119-177] 6.39E-16 - T[166-216] 6.14E-17 - T[226-278] 3.58E-11 |
| Pfam |
Znf_C2H2_type (IPR013087) - T[81-104] 0.0038 - T[140-162] 5.0E-5 - T[168-190] 1.2E-4 - T[196-219] 0.001 - T[227-246] 0.0079 |
| SMART |
Znf_C2H2_type (IPR013087) - T[81-104] 0.0042 - T[111-133] 8.7 - T[139-162] 0.0037 - T[168-190] 0.0019 - T[196-219] 0.0083 - T[227-250] 0.014 - T[256-278] 0.0034 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[81-109] 11.489 - T[111-138] 10.408 - T[139-167] 12.715 - T[168-195] 15.874 - T[196-224] 11.635 - T[227-255] 12.84 - T[256-280] 11.094 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[83-104] . - T[113-133] . - T[141-162] . - T[170-190] . - T[198-219] . - T[229-250] . - T[258-278] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN888_HUMAN | 41.791 % | 135 | 7.69E-36 |
| ZN454_HUMAN | 40.67 % | 139 | 8.45E-38 |
| ZNF28_HUMAN | 41.176 % | 140 | 1.01E-37 |