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TRANSCRIPT CARD

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  1. Region 'REG00000502'
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3737.g17978.01.t

Possible name(s)

ANGPT2; TNXB

Location

S3737 [8,140 / 9,177]

Sequences

Amino acid sequence

Length: 197

>Phmamm.CG.MTP2014.S3737.g17978.01.p
MLLQLTAILLYYTSLVSGQEQCSYVTVATCGDDVTVTPGNLLNQRGEKGDTGLPGMMGPL
GKRGLKGDIGPAGPKGDLGMPGVGERGFPGNKGNKGAIGQKGEALDLEDFKREMRGKIRE
IENLLPAVNCSTSSVNGYQRLRNYKKAVCEEGWVVFQRRFDGSVDFQRTWQEYKDGFGNM
EGEFWLGEQIILFKRVN

Nucleotide sequence

Length: 594

>Phmamm.CG.MTP2014.S3737.g17978.01.t
ATGTTGTTACAACTGACAGCGATTTTGCTGTACTATACGTCACTGGTCAGCGGACAGGAG
CAATGCAGTTACGTCACCGTTGCGACATGCGGTGATGACGTCACTGTCACGCCTGGGAAC
CTGTTAAATCAGAGGGGTGAAAAGGGGGACACTGGGTTACCAGGAATGATGGGTCCCCTG
GGCAAACGCGGATTGAAAGGAGATATTGGGCCTGCTGGTCCCAAGGGTGACTTAGGAATG
CCGGGAGTGGGTGAAAGGGGATTTCCCGGGAATAAAGGAAATAAAGGGGCGATCGGGCAA
AAGGGAGAGGCTTTGGATTTGGAAGATTTCAAGCGCGAAATGAGGGGGAAAATTCGAGAA
ATTGAAAATCTTCTACCTGCCGTCAACTGCTCTACGTCATCAGTGAACGGTTACCAGCGA
TTACGTAATTACAAGAAAGCGGTCTGTGAAGAAGGCTGGGTGGTTTTCCAACGACGATTT
GACGGAAGTGTGGATTTTCAGCGAACCTGGCAGGAATATAAAGATGGATTCGGAAACATG
GAAGGAGAATTCTGGCTCGGTGAACAAATAATTTTGTTTAAACGCGTAAATTGA

InterProScan

Pfam
Collagen (IPR008160) - T[46-103] 4.2E-8
Gene3D
Fibrinogen_a/b/g_C_1 (IPR014716) - T[107-192] 1.8E-19
ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[121-197] 15.786
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[146-191] 3.79E-20
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[150-190] 7.9E-16

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value