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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R16....'
  2. Molecular Tool 'Ci-bmp2b::Ci-Tbx6b'
  3. Clone 'csga011n12'
  4. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S373.g07945.01.t

Possible name(s)

PDIA4; PDIA5; TXNDC5

Location

S373 [21,073 / 26,270]

Sequences

Amino acid sequence

Length: 377

>Phmamm.CG.MTP2014.S373.g07945.01.p
MHRICHICLILFVAFKTGSCQEKAQEKTKGQELVYSESDFLENVGKSPHFVMFYAPWCGH
CQRLTPIWSKLSEDINPNDAIDMKFAKVDCTGETKLCSDEGVLGYPTLKLYRPDQETVRY
TGGRDIESLRRFAISSDESTPDAVQQEALTHNDGLYDITAESFDEHVSKGDHFIKFFAPW
CGHCKRMEPTWVDLAKAHIPSTDMTEDVKIGRGSRDLKSFETFITEMKELPRPDPESKEE
VVEAPSPTQAKEPEEDKKTSAVIELEENNFDFHTAVDVTFIKFYAPWCGFCKRLAPIWDK
LSYETFPGSLNVEIAKVDCTGNGDLCQKYEVQGYPTLLLFKDGEKISKFTGSRNLEDMKD
FVINTINALPSQEKDEL

Nucleotide sequence

Length: 1,134

>Phmamm.CG.MTP2014.S373.g07945.01.t
ATGCATCGTATATGTCACATTTGTTTAATATTGTTTGTTGCATTTAAAACTGGCTCGTGC
CAAGAAAAGGCACAAGAGAAAACGAAAGGACAGGAATTGGTGTATTCAGAGTCTGATTTT
CTGGAAAATGTGGGCAAATCTCCTCACTTTGTAATGTTTTACGCACCATGGTGTGGTCAT
TGTCAAAGGCTTACTCCAATTTGGAGCAAACTGTCTGAAGATATCAACCCCAATGATGCC
ATTGATATGAAATTTGCCAAGGTTGATTGTACTGGGGAAACGAAACTATGTTCTGATGAG
GGAGTTTTGGGCTACCCAACATTGAAACTTTATCGCCCTGACCAGGAGACTGTAAGGTAC
ACAGGTGGACGCGACATTGAATCTCTTCGAAGATTTGCAATCTCTTCAGATGAATCAACC
CCTGATGCTGTGCAGCAAGAAGCATTAACACACAATGATGGGCTATATGATATCACTGCA
GAAAGTTTTGATGAGCATGTTAGCAAAGGGGATCATTTTATCAAGTTTTTTGCACCCTGG
TGTGGCCATTGCAAACGAATGGAACCGACATGGGTGGACCTTGCTAAAGCCCACATACCA
TCAACAGATATGACAGAAGATGTAAAAATAGGAAGGGGTTCTCGGGATCTAAAAAGTTTT
GAAACATTTATTACTGAAATGAAAGAACTTCCGAGACCAGACCCAGAGAGCAAAGAAGAG
GTGGTTGAAGCTCCTTCGCCAACTCAAGCTAAGGAGCCTGAAGAGGACAAGAAAACCAGT
GCAGTTATTGAGCTTGAAGAAAATAACTTTGATTTTCATACTGCTGTTGATGTTACTTTC
ATCAAATTTTATGCTCCTTGGTGTGGGTTTTGCAAACGGCTTGCCCCAATCTGGGACAAA
CTTTCTTATGAGACTTTTCCTGGCTCGCTAAATGTGGAAATTGCAAAGGTTGACTGCACT
GGAAATGGCGATCTATGCCAGAAGTATGAGGTGCAAGGTTATCCTACCCTGTTGTTGTTC
AAAGATGGTGAAAAAATATCAAAGTTTACAGGAAGTAGGAATTTGGAGGACATGAAGGAT
TTTGTAATTAATACAATTAACGCACTTCCTTCACAAGAAAAAGATGAGCTTTAA

InterProScan

ProSiteProfiles
Thioredoxin_domain (IPR013766) - T[14-139] 13.084 - T[240-367] 15.943
SUPERFAMILY
Thioredoxin-like_sf (IPR036249) - T[30-134] 7.88E-27 - T[152-198] 6.64E-14 - T[254-367] 2.63E-31
Pfam
Thioredoxin_domain (IPR013766) - T[35-132] 4.4E-24 - T[158-198] 1.6E-11 - T[262-362] 3.4E-27
ProSitePatterns
Thioredoxin_CS (IPR017937) - T[50-68] . - T[173-191] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PDIA4_HUMAN 30.901 % 103 3.52E-24
TXND5_HUMAN 42.559 % 312 7.3E-104
PDIA6_HUMAN 28.807 % 101 1.08E-23