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TRANSCRIPT CARD

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  1. Clone 'cima822429' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S375.g07977.01.t

Possible name(s)

CELSR3; NOTCH3; SLIT2

Gene model

Phmamm.CG.MTP2014.S375.g07977

Location

S375 [86,137 / 90,732]

Sequences

Amino acid sequence

Length: 445

>Phmamm.CG.MTP2014.S375.g07977.01.p
MEENVIQNCVCNAGYQGEACEELVPPENDDSEDACFPNPCENGCQCRPSCKHELGYVCVS
EKGFIGKNCDIVIPRVACLESEIVVDISTEFFNEFDARIRNSYMYIAPSQDSKEKSNAQC
QAFQVGNFMQVSVPLPFNGCGTSMDDSKSGSNGITFMNRMWVNRGGSDLFDMPVPVLDFT
CIYDRNYSVVTSLMPKIDTVDRQITRSGNFDVRYGLCKVPLCIGNMQECPGIYKVGREEP
AVYTVGQMLHFHVKVLTMQDIVFQKTLVNTLEELFLSCDSNPFQQRLVTIASQGCPVPTA
FATSVTAGLVLDPQSICASLQVPRATSSGCKTIYLHARILLCDKNDLRVCNSDPNVLYCA
SARKRRAVDNEESAHFAIGPINVVQGSKGRAMEQLHIGDGYGGVITVSEPLGVDVDLPSF
TTEEPAEKTLDACSKMLSFYYLGNN

Nucleotide sequence

Length: 1,338

>Phmamm.CG.MTP2014.S375.g07977.01.t
ATGGAGGAAAATGTTATTCAGAACTGTGTCTGTAACGCCGGATATCAAGGGGAAGCATGT
GAGGAACTAGTTCCTCCTGAAAACGATGATAGCGAAGATGCGTGCTTCCCCAACCCGTGT
GAAAATGGTTGTCAGTGCAGACCGTCATGCAAGCACGAATTGGGTTACGTATGTGTAAGC
GAAAAGGGATTCATTGGCAAAAACTGCGACATTGTTATACCAAGGGTAGCCTGTCTTGAA
TCCGAAATCGTGGTGGATATTTCCACAGAATTCTTTAATGAGTTTGACGCAAGAATACGA
AACTCCTACATGTATATTGCTCCGTCGCAAGATTCAAAAGAGAAATCAAACGCCCAATGT
CAAGCATTTCAAGTTGGAAACTTTATGCAAGTTTCGGTTCCTTTGCCTTTTAACGGCTGC
GGAACCTCGATGGACGATTCTAAGAGCGGCTCAAACGGGATTACGTTCATGAACCGAATG
TGGGTGAACCGAGGTGGGAGTGATCTTTTCGATATGCCAGTTCCAGTGCTTGACTTCACC
TGCATCTATGACCGAAATTACTCCGTTGTGACTTCGCTTATGCCAAAAATCGACACAGTG
GACAGGCAAATCACACGCAGCGGAAATTTCGATGTGCGCTACGGTTTGTGCAAGGTTCCA
CTTTGCATCGGAAACATGCAAGAATGTCCTGGAATTTACAAGGTCGGCCGAGAAGAACCG
GCTGTATATACTGTTGGACAAATGCTTCATTTTCACGTGAAAGTCCTTACCATGCAGGAT
ATCGTGTTTCAAAAAACACTTGTTAACACTTTGGAGGAATTATTTCTTTCCTGCGATTCT
AATCCATTTCAACAAAGGCTGGTGACAATTGCATCTCAGGGGTGCCCAGTTCCCACAGCT
TTTGCAACATCCGTTACAGCAGGTCTGGTCTTGGACCCACAGTCAATCTGCGCCTCCCTG
CAAGTCCCCCGAGCGACATCTAGCGGGTGTAAAACTATCTATTTGCACGCTAGAATCCTA
CTCTGCGACAAGAATGATCTCCGGGTTTGCAACTCCGATCCAAATGTTCTGTACTGCGCC
TCGGCACGAAAACGTCGCGCCGTAGACAACGAAGAATCGGCGCACTTTGCTATCGGTCCC
ATCAACGTCGTTCAGGGCTCGAAAGGCAGAGCAATGGAACAGTTGCACATAGGTGACGGC
TACGGTGGTGTTATCACAGTTTCGGAACCTCTGGGTGTTGACGTTGATTTGCCGAGTTTT
ACCACAGAGGAACCGGCTGAAAAAACTTTGGATGCCTGCAGTAAGATGCTATCTTTTTAT
TATTTGGGTAACAATTAA

InterProScan

ProSitePatterns
EGF-like_CS (IPR013032) - T[9-20] . - T[9-20] .
ProSiteProfiles
ZP_dom (IPR001507) - T[77-366] 15.306
SMART
ZP_dom (IPR001507) - T[77-353] 0.0027
Pfam
ZP_dom (IPR001507) - T[78-347] 3.2E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value