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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3762.g18003.01.t

Possible name(s)

RDH12; RDH13

Gene model

Phmamm.CG.MTP2014.S3762.g18003

Location

S3762 [2,116 / 4,399]

Sequences

Amino acid sequence

Length: 150

>Phmamm.CG.MTP2014.S3762.g18003.01.p
MSKLPKPVSADGNWVKSDVKLPGKTVIITGANTGIGYWTAVDLVKREAKVIIACRNAEKA
QEAKDKIVKEAKCPDEKVVVKSLDLSSFASIRQFAEDINNTEERLDILINNAGVMLCPEG
KTEDGFETQFGVNHLGHFLLTNLLLDLIKE

Nucleotide sequence

Length: 453

>Phmamm.CG.MTP2014.S3762.g18003.01.t
ATGAGCAAACTTCCAAAACCAGTCAGTGCTGATGGAAATTGGGTAAAAAGTGATGTAAAG
TTGCCAGGGAAGACTGTAATAATAACTGGAGCAAATACTGGCATTGGTTATTGGACAGCA
GTTGATCTAGTGAAACGCGAGGCAAAAGTGATCATCGCTTGTCGGAACGCTGAAAAGGCT
CAAGAAGCCAAGGACAAGATTGTTAAAGAAGCAAAGTGCCCTGATGAAAAGGTTGTTGTT
AAAAGTCTTGACCTCTCTAGTTTTGCATCAATCAGACAATTTGCTGAAGATATTAATAAC
ACAGAAGAGAGGCTCGACATACTCATTAATAATGCAGGAGTGATGCTGTGTCCAGAAGGC
AAGACTGAAGATGGATTTGAAACACAATTTGGGGTCAACCATCTTGGGCACTTCCTTCTC
ACAAACTTGCTGTTGGATCTTATCAAGGAGTAA

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[21-149] 4.14E-35
Pfam
SDR_fam (IPR002347) - T[24-148] 6.1E-22
PRINTS
SDR_fam (IPR002347) - T[25-42] 6.1E-7 - T[103-114] 6.1E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 55.906 % 140 1.16E-41
RDH14_HUMAN 48.837 % 130 1.04E-37
RDH12_HUMAN 55.118 % 138 1.1E-40