- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Cisavi.CG.ENS81.R352...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S3764.g18004.01.t
Possible name(s)
TBX2; TBX4; TBX6
Gene model
Location
S3764 [8,383 / 10,271]
Amino acid sequence
Length: 470
>Phmamm.CG.MTP2014.S3764.g18004.01.p
MATQIMNNFQHCTAPWFQATSETHLAHDVDELHRTTVQDYQVIDKKYSQVVRSPYEENVQ
VDLQDLEVWDKFSAAKTEMIVTKPGRRIFPGYRVKFLGLDPNAQYCVLMDVVNVDEHRYK
FQNGEWIVSGRGEPKIPQKFYIHPKSPSSGGKLMKEVLSFHKVKLTNSFAHSATEKFNVH
SMHRYQLRVHLIRTDDVTMIKHEPMSTFSFPQTTFFTVTAYQNHEVTKLKIANNPFARGF
RCDGGKTKNARRFCDVPEYNCDAMQTNKRLKVAVPPNIINPVAATYTGYSNFQPHLSPQA
TNFPTTCITVNPTLDQYSSSHPYSASANVIHPGYLPVYNEQQLGYDVSCTSPFSNTEQYN
EHTVGNNSPQFTQSSPPFTREPTQQFSYPSPTYSQHSPQQFQPINNFEETNFVFPPQQTV
NNQFSNNFDHFNPICVDSNNISPVSTNANFFASSSFSSEPVSPTYESLNY
Nucleotide sequence
Length: 1,413
>Phmamm.CG.MTP2014.S3764.g18004.01.t
ATGGCAACTCAAATAATGAACAACTTTCAACATTGCACTGCTCCGTGGTTTCAAGCAACA
TCTGAAACTCATTTAGCGCATGATGTTGATGAGCTACATCGAACAACTGTTCAAGATTAT
CAAGTCATCGATAAAAAATATTCACAAGTGGTTCGATCCCCGTATGAAGAGAATGTTCAA
GTTGATCTTCAGGATCTTGAAGTTTGGGACAAATTTTCAGCTGCAAAAACTGAGATGATT
GTCACAAAACCTGGAAGACGAATCTTTCCTGGTTACCGAGTGAAGTTCTTAGGTTTGGAT
CCGAACGCGCAGTATTGTGTCTTGATGGATGTTGTTAATGTTGACGAACACAGATACAAG
TTCCAGAACGGCGAATGGATTGTGTCTGGCCGAGGAGAGCCTAAAATTCCCCAGAAATTT
TATATTCACCCAAAGTCACCATCCAGTGGCGGAAAACTAATGAAAGAAGTTCTTTCGTTC
CACAAAGTGAAACTTACGAACTCATTTGCACATTCAGCAACTGAAAAGTTCAACGTCCAC
TCAATGCACCGTTATCAATTGCGCGTTCACCTTATTCGAACTGATGACGTAACAATGATC
AAGCATGAACCGATGTCAACATTTTCATTTCCACAAACCACTTTTTTCACAGTGACAGCT
TATCAAAATCACGAGGTGACCAAACTAAAAATTGCCAACAATCCCTTTGCGCGAGGATTT
CGGTGCGATGGTGGAAAGACAAAAAACGCCAGACGTTTCTGTGATGTTCCGGAATACAAC
TGTGACGCCATGCAGACAAACAAACGGCTGAAAGTGGCGGTTCCTCCCAACATCATAAAC
CCTGTTGCTGCGACATATACTGGATATTCAAACTTCCAACCACATCTCTCTCCACAAGCG
ACCAACTTTCCCACCACTTGTATCACCGTTAACCCGACGCTGGATCAATACTCTTCATCT
CATCCTTATTCCGCATCAGCGAACGTTATTCATCCGGGATACTTGCCAGTTTACAACGAG
CAACAGTTGGGTTACGATGTGAGCTGTACGTCACCTTTCAGCAACACTGAACAATACAAC
GAACATACCGTTGGAAACAACTCGCCACAGTTCACCCAAAGCTCACCTCCTTTTACCCGA
GAACCGACACAGCAGTTTTCCTACCCATCGCCAACCTATTCGCAACATTCACCCCAGCAG
TTTCAACCAATCAACAATTTTGAAGAAACCAATTTTGTTTTTCCTCCACAACAAACAGTC
AATAACCAATTTTCAAATAATTTTGACCACTTTAATCCAATTTGTGTGGACTCAAACAAT
ATTTCTCCAGTTTCTACTAATGCCAATTTCTTTGCTTCGTCGAGTTTTTCTTCTGAACCT
GTTTCACCTACTTATGAGAGTCTTAACTATTGA
| PANTHER |
TF_T-box (IPR001699) - T[18-262] 2.5E-103 |
| Gene3D |
T-box_sf (IPR036960) - T[55-249] 1.3E-75 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[58-241] 1.19E-64 |
| CDD |
TF_T-box (IPR001699) - T[58-244] 2.9059E-93 |
| SMART |
TF_T-box (IPR001699) - T[58-246] 2.9E-93 |
| Pfam |
TF_T-box (IPR001699) - T[61-241] 6.3E-69 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[63-242] 64.168 |
| PRINTS |
TF_T-box (IPR001699) - T[76-100] 4.5E-32 - T[141-154] 4.5E-32 - T[158-167] 4.5E-32 - T[178-192] 4.5E-32 - T[213-226] 4.5E-32 - T[234-242] 4.5E-32 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 48.454 % | 205 | 5.0E-61 |
| TBX2_HUMAN | 43.478 % | 203 | 3.64E-58 |
| TBX4_HUMAN | 45.545 % | 202 | 4.0E-59 |