- Transcript 'Moocul.CG.ELv1_2.S12...' >
- Transcript 'KH2012:KH.L37.15.v1....' >
- Transcript 'KH2012:KH.C12.696.v1...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S3795.g18028.01.t
Possible name(s)
DDX58; DHX58; IFIH1
Gene model
Location
S3795 [571 / 7,682]
Amino acid sequence
Length: 354
>Phmamm.CG.MTP2014.S3795.g18028.01.p
MGIYIDKRLDASSDVSLPQIVGLTASPGMGKNIKTLMANLDITKAPTQVNSIKTETREKV
GPLKQVNNLLLELHKVLLDEFSRQSDSCCIIFVQTRSIAGGVITYMEEEQDLMKFGLNPK
LLTGAGVSGDKGGMTKRKQKNTVEAFHQGKCKVIVATSVAEEGLDIPACNLTINYNYSTN
DVGHVQRKGRSRAANSQTVTLAYDDSGHVQKELENKIQVELTDEMLGTIREIPPKTLQKQ
HHVIVDPGFVKRAGFKTEKDPEKWKELADDYFETGKMYCANKYCRNHLGFRMKHKHLTLS
VPKVTSFLFTNQSGSREIFEKWSQVTFEVNELTDSNLDELLPMEEIEIDEVDYD
Nucleotide sequence
Length: 1,065
>Phmamm.CG.MTP2014.S3795.g18028.01.t
ATGGGGATATATATTGACAAACGACTCGATGCAAGCAGTGATGTTTCCCTACCACAGATT
GTTGGCCTGACAGCTTCACCAGGAATGGGAAAAAACATAAAAACTTTGATGGCAAATTTG
GATATTACCAAAGCTCCAACACAAGTGAATTCGATTAAAACTGAAACAAGAGAAAAGGTT
GGACCCTTGAAACAAGTGAACAATCTTTTGCTGGAACTGCACAAAGTTTTATTGGATGAA
TTCAGTCGGCAAAGCGATTCCTGTTGTATTATATTTGTGCAGACCCGCAGCATCGCTGGT
GGAGTGATCACTTACATGGAAGAAGAGCAGGATCTGATGAAGTTTGGTTTGAATCCGAAA
TTGCTCACGGGTGCTGGAGTCAGCGGAGATAAAGGAGGAATGACAAAACGTAAGCAGAAA
AATACTGTGGAAGCATTCCATCAGGGAAAGTGCAAAGTGATAGTTGCAACGTCCGTGGCT
GAGGAAGGTCTGGATATTCCAGCTTGCAATCTTACTATCAATTACAATTACTCAACCAAT
GACGTCGGGCATGTACAACGTAAAGGTCGCAGCAGAGCAGCTAACAGTCAGACTGTGACG
TTGGCTTATGACGACAGTGGTCACGTGCAAAAAGAGCTGGAAAATAAGATTCAGGTTGAA
CTCACAGATGAAATGCTGGGTACGATCAGGGAAATACCCCCCAAAACCTTACAAAAACAG
CATCATGTTATTGTGGATCCTGGGTTTGTGAAGCGCGCTGGTTTTAAAACCGAGAAAGAC
CCGGAAAAGTGGAAGGAATTGGCTGACGATTATTTTGAGACCGGAAAAATGTATTGCGCG
AACAAATACTGCAGAAACCACTTGGGATTCCGGATGAAACATAAACATCTTACACTCTCC
GTTCCCAAGGTAACTAGTTTCCTTTTCACCAACCAATCAGGAAGCAGGGAGATATTCGAG
AAATGGAGTCAGGTCACTTTCGAGGTTAATGAGCTGACTGATAGCAATTTGGACGAACTT
CTGCCCATGGAAGAAATCGAGATCGACGAAGTTGATTACGACTGA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[18-208] 5.16E-23 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[65-233] 15.712 |
| Pfam |
Helicase_C (IPR001650) - T[77-191] 2.2E-17 |
| CDD |
Helicase_C (IPR001650) - T[89-190] 3.16013E-12 |
| SMART |
Helicase_C (IPR001650) - T[106-194] 2.0E-13 |
| ProSiteProfiles |
RLR_CTR (IPR021673) - T[207-339] 18.562 |
| Gene3D |
RLR_C_sf (IPR038557) - T[230-343] 1.2E-18 |
| Pfam |
RLR_CTR (IPR021673) - T[235-333] 8.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX58_HUMAN | 28.939 % | 112 | 2.5E-27 |
| DDX58_HUMAN | 25.161 % | 97.8 | 3.8E-22 |
| IFIH1_HUMAN | 26.444 % | 106 | 3.49E-25 |