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TRANSCRIPT CARD

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  1. Clone 'cien111365' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3838.g18056.01.t

Possible name(s)

COL11A2; COL5A3; COL6A5

Gene model

Phmamm.CG.MTP2014.S3838.g18056

Location

S3838 [8,639 / 9,496]

Sequences

Amino acid sequence

Length: 186

>Phmamm.CG.MTP2014.S3838.g18056.01.p
MLLQLTAILLYYTSLISGQQQCSYVTVPVCGDDVTVTPGSLISGRGEKGVAGPPGKMGPR
GFTGQKGDIGAVGLKGDVGPPGEVGLRGLPGLKGDQGAVGQKGAVGLTGAAGSSGESGQQ
GPIGPTGYKGDVGPPGETGGQVNEQDFKQRFINEQDFKQRFKFVRMTAVSLLVWQYIAQQ
NHEVLM

Nucleotide sequence

Length: 561

>Phmamm.CG.MTP2014.S3838.g18056.01.t
ATGTTGTTACAACTGACAGCGATTTTGCTGTATTATACGTCACTGATCAGCGGACAGCAG
CAATGCAGTTACGTCACCGTTCCAGTGTGTGGTGATGACGTCACTGTCACACCTGGCAGT
CTGATAAGTGGGAGGGGAGAAAAGGGCGTCGCTGGGCCACCAGGAAAAATGGGACCTAGG
GGATTTACCGGACAAAAAGGGGATATCGGCGCCGTAGGGCTGAAAGGCGATGTTGGGCCG
CCCGGCGAAGTGGGTTTACGGGGACTTCCCGGGTTAAAAGGCGATCAAGGGGCTGTTGGA
CAAAAGGGAGCTGTTGGTTTGACTGGAGCGGCAGGGTCAAGCGGAGAATCTGGTCAGCAA
GGTCCGATTGGGCCTACAGGATATAAGGGAGACGTGGGGCCGCCCGGCGAAACTGGAGGT
CAAGTTAATGAACAGGATTTTAAACAAAGGTTTATTAATGAACAGGATTTTAAACAAAGG
TTCAAGTTTGTTCGTATGACAGCTGTCAGTTTGTTGGTATGGCAGTACATTGCGCAACAG
AACCATGAGGTTTTGATGTGA

InterProScan

Pfam
Collagen (IPR008160) - T[46-104] 6.3E-11 - T[88-139] 4.1E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value