- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S647...' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S384.g08093.01.t
Possible name(s)
LRIG2; LRIG3; LRRC15
Gene model
Location
S384 [52,952 / 55,718]
Amino acid sequence
Length: 408
>Phmamm.CG.MTP2014.S384.g08093.01.p
MEQQTQLQITHLKSSNSPLVGNYPPVKNHCTRVISHYGNETTVTVTCHLDGPITINENFT
YATLHGIQNFAKQKESALTDTEDDTTSNTISYRLIMADSGVSAIEDGGLGSVPNLKELNF
GKNSLTNIGLLTFSGASNLEILDLGDNSITTIQPRSFVPLSSAKTLNLNNNNLTSINFFT
FQGLDQVNFINLDNNNISLWSSAAFASLWQLEYLHLAYNRISSLDGSKLTGMNSLKYLSL
KDNVIESIEDGAFNGKPNLETLDLSGNKLSKITVDTFRGLTSLKTLNLRYNVIRTIDDYS
FAQMHQLRELDLSHNGLATLSRGMLVGMENINSFNVADNWMQATALSSEPEFDEPRNKLI
EAIGVVCRKPGVYYADFSGNSLTSMLQNVTEQALGFDFSDPSQHVCVF
Nucleotide sequence
Length: 1,227
>Phmamm.CG.MTP2014.S384.g08093.01.t
ATGGAACAACAAACCCAACTTCAAATTACCCACTTGAAATCCTCAAATTCCCCACTAGTG
GGTAATTACCCACCGGTTAAGAACCACTGCACTAGGGTCATATCTCACTATGGCAACGAA
ACCACTGTGACGGTCACGTGTCACCTTGACGGACCAATCACAATCAATGAAAACTTTACA
TATGCGACTCTCCACGGAATTCAAAACTTCGCCAAGCAAAAAGAGTCTGCGCTTACTGAT
ACAGAAGATGACACAACTTCAAACACAATCTCATATCGCCTTATCATGGCCGACTCTGGG
GTCAGCGCTATAGAAGATGGTGGTTTGGGATCCGTACCTAATCTTAAGGAACTTAACTTT
GGCAAAAATAGCCTTACCAATATTGGGCTTTTGACCTTTTCTGGTGCATCGAATCTTGAG
ATTCTGGATTTGGGAGATAACTCCATCACAACTATCCAACCAAGATCGTTCGTGCCACTG
AGCAGCGCTAAGACTTTGAATTTGAACAACAACAATCTTACTTCGATCAACTTCTTCACA
TTTCAGGGACTTGACCAGGTCAACTTCATCAACCTTGATAACAACAACATCAGCTTGTGG
TCCAGCGCCGCGTTCGCGTCTCTATGGCAACTCGAGTACCTCCACCTCGCCTACAACCGT
ATTTCCTCACTTGATGGCAGCAAACTTACAGGAATGAACTCTCTTAAATATTTATCTCTG
AAGGACAACGTGATCGAAAGCATCGAGGATGGTGCTTTCAACGGCAAACCAAATTTAGAG
ACCTTGGACTTGTCTGGCAACAAATTGAGTAAGATTACGGTGGACACGTTCAGAGGTCTT
ACATCACTGAAAACATTAAATCTGCGCTACAACGTCATCAGAACAATTGACGACTATTCC
TTTGCTCAAATGCATCAGTTGCGCGAGTTGGATCTGTCACATAATGGTCTCGCAACATTG
AGTCGAGGCATGCTTGTTGGAATGGAAAACATCAACAGTTTTAACGTAGCCGACAATTGG
ATGCAGGCAACTGCTCTCTCATCGGAACCTGAGTTCGACGAACCGAGAAACAAATTGATT
GAAGCTATTGGAGTCGTATGTCGCAAGCCAGGAGTTTACTATGCAGACTTTTCTGGAAAC
TCTCTGACTTCTATGCTTCAGAATGTGACAGAACAAGCTCTTGGCTTTGATTTCTCGGAT
CCCAGTCAACATGTCTGCGTTTTTTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[67-218] 5.3E-26 - T[219-359] 4.6E-35 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[112-135] 13.0 - T[137-159] 8.5 - T[160-183] 13.0 - T[184-207] 51.0 - T[208-231] 63.0 - T[232-255] 0.74 - T[257-279] 0.13 - T[280-303] 0.053 - T[304-327] 0.014 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[113-173] 5.9E-13 - T[257-317] 1.6E-19 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[114-135] 6.942 - T[138-159] 7.866 - T[162-183] 6.95 - T[186-207] 4.57 - T[210-230] 7.435 - T[234-255] 7.319 - T[258-279] 8.336 - T[282-303] 7.92 - T[306-327] 6.649 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRC15_HUMAN | 32.636 % | 101 | 2.56E-23 |
| LRIG2_HUMAN | 33.491 % | 107 | 5.25E-25 |
| LRIG3_HUMAN | 32.456 % | 109 | 1.4E-25 |