- Clone 'AHC0AAA117YH01' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- EST 'AHC0AAA229YC19_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S3965.g18136.01.t
Possible name(s)
CCT3; CCT7; TCP1
Gene model
Location
S3965 [4,056 / 7,543]
Amino acid sequence
Length: 542
>Phmamm.CG.MTP2014.S3965.g18136.01.p
MQPPIILLKEGTDTSQGIPQLVSNINACQVVAEAIRTTLGPRGMDKLIVENNGKATISND
GATILKLLDVVHPAAKTLVDISKSQDSEVGDGTTSVTLLGAEFLKQAKQFVEDGVHPQII
VRAYRKATQLAIEKIKEIQVEIKKDDPKEQRSLLEKCAATALSSKLIASYKDLFAPMVVD
AVQSLDELLPLNMIGIKKISGGALEESKLVAGVAFKKTFSYAGFEMQRKKYVNPKIALLN
VELELKSEKENAEVRVNNVSDYQEIVDAEWQILYDKMNLIKDSGANVVLSKLPIGDVATQ
FFADHDMFCAGRVTEQDLKRTMKACGGSIQTSVQQLTDDVLGTCEEFEEEQVGGERFNFF
RGCTQAKTCTILLRGGAEQFMEETERSLHDAIMIVRRAIKNDAVVAGGGAIEMEISKTLR
NFARTIRGKQQSLISAYGKALEIIARQLCENAGFDSTNILNKLRQVHSKDDGKWFGIDIN
NEDITDNFVACVWEPSVVKINALTAASEAACLILSVDETVKNPRSGQGDAQMPAGRGRGR
PR
Nucleotide sequence
Length: 1,629
>Phmamm.CG.MTP2014.S3965.g18136.01.t
ATGCAACCACCAATAATTCTCCTCAAAGAAGGGACTGACACATCCCAGGGAATTCCTCAA
CTAGTCAGCAACATCAATGCATGTCAGGTTGTTGCTGAAGCTATCAGGACCACCCTTGGC
CCAAGAGGAATGGATAAACTGATAGTTGAAAACAATGGGAAAGCCACTATTTCCAATGAT
GGTGCAACTATTTTAAAGCTTCTAGATGTTGTACATCCTGCAGCTAAAACGTTGGTGGAC
ATTTCAAAATCTCAAGATTCTGAGGTTGGAGATGGGACAACATCTGTTACATTGTTGGGA
GCTGAGTTTTTAAAGCAAGCCAAGCAATTTGTTGAGGATGGTGTTCATCCACAGATTATT
GTCAGAGCATACAGAAAAGCAACTCAGCTTGCAATAGAAAAGATAAAAGAAATTCAAGTT
GAAATTAAAAAGGACGACCCTAAGGAACAGAGAAGCCTGCTTGAAAAGTGTGCTGCAACT
GCACTGAGCTCCAAGCTGATTGCCTCCTACAAGGACTTGTTTGCTCCCATGGTTGTGGAT
GCAGTTCAGTCTCTTGATGAACTATTGCCATTAAATATGATTGGAATTAAAAAAATATCA
GGAGGCGCTTTAGAGGAGTCAAAACTTGTTGCTGGTGTTGCCTTTAAGAAAACTTTTTCC
TATGCTGGCTTTGAAATGCAAAGGAAGAAGTATGTTAACCCCAAAATAGCATTGTTAAAT
GTTGAGCTGGAACTGAAATCAGAAAAGGAGAATGCTGAAGTTCGTGTCAACAATGTTTCA
GACTACCAGGAGATTGTTGATGCTGAATGGCAAATTCTCTATGACAAAATGAACCTGATC
AAAGACAGCGGTGCTAATGTTGTTCTCAGTAAACTTCCTATCGGGGATGTGGCTACCCAG
TTTTTCGCAGACCATGACATGTTTTGTGCAGGAAGGGTAACTGAACAGGACTTAAAGCGT
ACCATGAAGGCTTGTGGAGGAAGCATTCAAACCAGTGTTCAACAATTAACTGATGATGTA
CTTGGCACATGTGAGGAGTTCGAAGAGGAGCAAGTAGGAGGAGAAAGGTTCAACTTCTTC
CGAGGATGCACACAGGCTAAAACCTGCACAATCCTTTTACGTGGAGGTGCCGAGCAGTTC
ATGGAAGAAACTGAAAGATCATTACATGATGCCATAATGATTGTTCGCAGAGCAATTAAG
AATGATGCAGTAGTTGCTGGTGGTGGTGCAATTGAGATGGAAATCAGCAAAACCCTTCGA
AACTTTGCTAGAACCATTCGTGGAAAACAGCAGTCCCTTATTTCAGCCTATGGCAAGGCC
CTTGAAATTATTGCTCGCCAACTTTGTGAAAATGCTGGCTTTGATTCAACCAATATTTTG
AACAAACTGCGACAAGTTCATTCGAAGGATGATGGCAAATGGTTCGGCATTGACATCAAC
AATGAGGATATAACTGACAACTTTGTTGCTTGTGTATGGGAACCGTCTGTGGTCAAGATC
AACGCACTCACCGCTGCGTCGGAGGCAGCTTGTCTTATTCTCTCAGTTGATGAAACAGTA
AAAAATCCGAGATCTGGTCAAGGTGATGCTCAAATGCCTGCTGGACGTGGTCGCGGACGT
CCAAGATAA
| TIGRFAM |
Chap_CCT_eta (IPR012720) - T[2-525] 4.5E-266 |
| CDD |
Chap_CCT_eta (IPR012720) - T[4-525] 0.0 |
| PANTHER |
Chap_CCT_eta (IPR012720) - T[10-526] 1.4E-211 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[14-522] 7.59E-85 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[24-520] 1.9E-183 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[31-522] 8.7E-157 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[33-49] 2.5E-30 - T[55-73] 2.5E-30 - T[85-104] 2.5E-30 - T[370-392] 2.5E-30 - T[404-416] 2.5E-30 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[36-48] . - T[57-73] . - T[85-93] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[143-402] 1.9E-183 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[150-401] 4.27E-27 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[206-375] 1.88E-48 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[212-366] 1.9E-183 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 35.206 % | 306 | 1.03E-97 |
| TCPH_HUMAN | 78.667 % | 853 | 0 |
| TCPG_HUMAN | 30.869 % | 288 | 1.51E-90 |