Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C3.383.v1....'
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S39.g01535.01.t

Possible name(s)

CRYAB; HSPB1; HSPB6

Location

S39 [281,185 / 281,821]

Sequences

Amino acid sequence

Length: 211

>Phmamm.CG.MTP2014.S39.g01535.01.p
MAVRIIRPTRCCARRNPYARCGNAWNPLSIFEPRYQDQFEEMMMLRLPSLIRVFEKELGE
KNEKKSTDDTKSDVEPFTYDFQLEGFKPDEITVKTVGQKVVVEAKSEEESEKDGLRSLSR
KEYHRSLILPEGIVSEKLTSSLRPNGVLQITAPRLALKAHEEKKVNIEIETTKSSDESIS
KGTKDVATKTDANKSAGSEEIATSLKDQTDE

Nucleotide sequence

Length: 636

>Phmamm.CG.MTP2014.S39.g01535.01.t
ATGGCTGTACGTATAATTCGACCTACGCGTTGTTGTGCGAGACGAAATCCGTATGCAAGA
TGTGGAAACGCCTGGAATCCTCTCTCTATCTTTGAGCCAAGATATCAAGACCAATTTGAA
GAAATGATGATGCTGAGATTGCCTTCACTCATACGGGTGTTTGAAAAGGAACTTGGTGAA
AAAAATGAGAAAAAGTCAACGGACGATACGAAATCCGATGTTGAGCCATTTACTTACGAC
TTCCAACTTGAAGGATTTAAACCTGACGAAATCACAGTGAAAACTGTCGGTCAGAAAGTC
GTGGTAGAAGCAAAAAGTGAGGAAGAATCAGAGAAAGACGGATTGCGATCTCTCAGTCGC
AAAGAATATCACAGGTCGTTGATTTTACCAGAAGGAATCGTCTCTGAAAAGCTCACTTCG
AGTTTGCGACCAAATGGCGTCTTACAAATCACAGCTCCTCGTCTGGCGCTGAAAGCTCAT
GAAGAAAAGAAAGTTAACATCGAAATCGAAACCACCAAATCATCAGATGAATCTATTTCA
AAGGGAACTAAGGACGTAGCAACCAAAACTGATGCTAACAAAAGCGCTGGTTCAGAAGAA
ATTGCAACCAGCTTAAAGGATCAGACTGATGAATGA

InterProScan

Gene3D
HSP20-like_chaperone (IPR008978) - T[50-188] 2.8E-22
ProSiteProfiles
A-crystallin/Hsp20_dom (IPR002068) - T[59-170] 18.932
PANTHER
HSP20 (IPR031107) - T[64-178] 5.2E-21
Pfam
A-crystallin/Hsp20_dom (IPR002068) - T[71-167] 2.7E-19
SUPERFAMILY
HSP20-like_chaperone (IPR008978) - T[77-167] 4.53E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value