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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R16....'
  2. Transcript 'KH2012:KH.L116.85.v1...'
  3. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S39.g01536.01.t

Possible name(s)

CRYAB; HSPB1; HSPB6

Location

S39 [287,468 / 288,119]

Sequences

Amino acid sequence

Length: 216

>Phmamm.CG.MTP2014.S39.g01536.01.p
MAVRVFYPTQCCVRRAPCARYVNSWSPLSIFEPRYQDPFEEMLTIGLPRLLQMFEKELGE
KKEQTSTDDAKSVVEPFTYDFQLEGFKPDEITVKTVGQKVVVEAKSEEESEKDGLRSLSR
KEYHRSLILPEGIDAEKLTSSLRPNGVLQITAPRLALKAPEENNVEAAVESKEPMISTES
KTSDETVSDEPLAEPSVSSTEASSNDDETPNTSKTT

Nucleotide sequence

Length: 651

>Phmamm.CG.MTP2014.S39.g01536.01.t
ATGGCTGTTCGTGTATTTTACCCAACCCAGTGCTGCGTGAGACGAGCTCCGTGCGCAAGA
TATGTTAACAGCTGGAGTCCTCTCTCTATTTTTGAGCCAAGATATCAAGATCCATTTGAA
GAAATGTTGACGATAGGACTACCAAGACTTCTTCAAATGTTTGAAAAGGAGCTTGGTGAA
AAGAAAGAGCAAACTTCAACGGACGATGCGAAATCAGTTGTTGAGCCGTTTACTTATGAT
TTCCAACTTGAAGGATTCAAACCTGACGAAATTACAGTGAAAACTGTCGGTCAGAAAGTC
GTGGTAGAAGCAAAGAGTGAAGAAGAATCAGAGAAAGACGGATTGCGATCTCTCAGTCGC
AAAGAATATCACAGGTCGTTGATTTTACCAGAAGGAATCGATGCTGAAAAGCTCACTTCA
AGTTTGCGACCAAATGGCGTTCTACAAATCACAGCTCCTCGTCTGGCGCTGAAAGCTCCT
GAAGAAAATAATGTTGAAGCAGCAGTCGAAAGTAAAGAACCGATGATAAGCACCGAATCG
AAAACATCAGATGAAACAGTTTCAGACGAACCACTGGCCGAGCCAAGTGTTTCTTCAACG
GAAGCGTCATCAAATGATGATGAAACACCAAACACATCAAAGACGACTTGA

InterProScan

Gene3D
HSP20-like_chaperone (IPR008978) - T[42-155] 2.2E-21
ProSiteProfiles
A-crystallin/Hsp20_dom (IPR002068) - T[59-170] 17.605
PANTHER
HSP20 (IPR031107) - T[64-177] 4.9E-23
Pfam
A-crystallin/Hsp20_dom (IPR002068) - T[75-164] 2.5E-19
SUPERFAMILY
HSP20-like_chaperone (IPR008978) - T[80-163] 2.13E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value