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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L37.41.v1....'
  2. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3.g00129.01.t

Possible name(s)

MCHR1; OPRK1; SSTR2

Location

S3 [95,425 / 97,507]

Sequences

Amino acid sequence

Length: 311

>Phmamm.CG.MTP2014.S3.g00129.01.p
MLNYYASILFLTVMSIDRYLAINHAMSAKFSKFRTRKAVDIISGLVWGAGFLAVIFVIIH
AKVEGCRCLLSFGEKTHNNDYSDVNLGNETYGAYYDLDYPNETDSRLTSIYDVPGACSLV
GNYELNNWIICNFVLAFVMPLIIVCACYAEIIKKIYEPMSVGTKSQKSNNTRKRVTRMVT
SLVLVFVLCWLPYHIFMLSRVGGNQLTSNQCGFVRELMLALAYLSSALNPFLYTFLGTNF
RKRWRNAVGRTRSFRPSVGSRSGAEYAPGRKSRRKSSGVSMTGHKSQDDSNVTKHTVIQT
NHIVRQDEIKL

Nucleotide sequence

Length: 936

>Phmamm.CG.MTP2014.S3.g00129.01.t
ATGTTAAACTACTACGCCTCCATTCTGTTTTTGACTGTGATGTCTATTGATCGGTATTTG
GCCATAAACCACGCAATGAGTGCCAAGTTTAGCAAGTTCCGTACACGAAAAGCCGTTGAC
ATCATCAGTGGGTTGGTGTGGGGTGCTGGGTTTCTTGCTGTCATATTTGTGATAATTCAT
GCCAAAGTGGAAGGATGCAGATGCCTATTGTCATTCGGAGAGAAAACCCATAATAATGAC
TACTCGGATGTGAACCTGGGAAACGAAACTTACGGTGCGTACTACGATCTCGACTATCCG
AATGAAACGGACAGCAGGTTGACAAGCATATATGATGTTCCCGGTGCCTGTAGCTTAGTA
GGAAACTACGAGCTTAACAACTGGATCATTTGCAATTTTGTGTTGGCATTTGTAATGCCG
TTGATCATCGTATGTGCTTGTTACGCAGAGATTATTAAGAAAATATACGAGCCTATGTCA
GTAGGAACCAAATCGCAAAAATCGAACAATACCAGGAAGAGAGTTACACGTATGGTTACA
AGTTTGGTCTTGGTCTTCGTGTTGTGCTGGCTTCCATACCATATATTCATGTTGTCACGC
GTTGGAGGCAACCAACTTACATCTAATCAGTGCGGCTTCGTGCGCGAGTTGATGTTGGCG
TTAGCTTATCTAAGCAGTGCCCTTAATCCATTTTTGTACACATTCCTCGGAACTAACTTT
CGCAAGCGATGGAGAAACGCAGTTGGCCGAACTCGCTCGTTTCGACCAAGCGTGGGAAGC
CGCAGTGGAGCTGAATACGCCCCTGGTAGAAAATCAAGGCGCAAATCTTCAGGAGTTTCA
ATGACGGGCCATAAGTCACAGGACGACTCAAACGTCACAAAACATACAGTTATCCAAACT
AACCACATCGTCCGACAAGATGAAATCAAGTTGTAA

InterProScan

ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[1-233] 28.957
Pfam
GPCR_Rhodpsn (IPR000276) - T[2-63] 3.9E-10 - T[127-233] 2.6E-19
ProSitePatterns
GPCR_Rhodpsn (IPR000276) - T[6-22] .
PRINTS
GPCR_Rhodpsn (IPR000276) - T[129-152] 2.0E-21 - T[175-199] 2.0E-21 - T[215-241] 2.0E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SSR2_HUMAN 31.111 % 109 1.48E-27
OPRK_HUMAN 30 % 90.1 2.2E-20
OPRM_HUMAN 27.273 % 82 1.48E-17