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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...'
  2. Transcript 'Boleac.CG.SB_v3.S814...'
  3. Region 'REG00000077'
  4. Transcript 'KH2012:KH.L18.18.v3....'
  5. Transcript 'Phmamm.CG.MTP2014.S3...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S3.g00130.01.t

Possible name(s)

Phmamm.CG.MTP2014.S3.g00130

Location

S3 [101,936 / 104,849]

Sequences

Amino acid sequence

Length: 782

>Phmamm.CG.MTP2014.S3.g00130.01.p
MDMEPKKNGQELADQLRGCCCLENGFYIEDNTKESSAAMIELSHHYYRIRSEEKRNYLYA
AGLLAAAKVRLSKNDVTDGFMLKLWKELLADSGAKNTEVDFFTVVVELKEKVSKMRKLVE
KQIADIPKVTEKGNKFLQEQKKIDATKKVFIYCNENYIDIMRYVSDKICQVLFDSELPCE
FAHLVFGSVARMEGSPFSDFENAIIISQRTDEILERFRFYIVLFQFVIINLGETPVRLLG
IPLLNDFYSDRKSKDWFYDKFTSLGVRFDSNMPAASVHPLSRDPTTDKPFKVELIGTVNE
IARFLEHDEALRNGYHLADVLSRSRLVSGNFKLHEEYRTQVDNKLRMSKDWIRERIKNCM
ETLDGADELCTPFSKRNIKLLIYRGISVTISHLGNLFGVRSSSCFDIVDELVESGQLPAE
AGHNLKYAVALAGEIRLKIYMAAGEQVPETDLVTKDDGKEMSDIISAVGNESICDYFYIA
QTLWRDLHPFVMQESTSISFSSEPKVDPAMRFAIQTTLLGVDTTLFAEQKDAYRDYKRAM
ENLQTFLKASLKDVRLINLLPSVVYTLHCVADFVSSFNRTMASYLANPDTSNTEQLLIEL
DDISSAMDGFIMTLPEKEIPIFHEKINRVMKFFFDINNWSFVMPAYCKVVRRDLKIITAE
VKSTRGELLTRNGEYALATEDLYTAHRILTDNSREKDWFELKVAANMHNIGKTLCSCEKF
SEALTWFREELDHRLIKVPKKTGKVHLGPNYHFQAKCLRAIGTDKALAEADIYIESEIEL
FL

Nucleotide sequence

Length: 2,349

>Phmamm.CG.MTP2014.S3.g00130.01.t
ATGGATATGGAACCGAAAAAGAACGGACAAGAATTGGCTGACCAGTTGAGAGGTTGTTGT
TGCTTGGAAAATGGGTTTTACATCGAAGATAACACTAAAGAGTCTTCTGCCGCTATGATC
GAGTTATCCCATCATTACTATAGAATACGCAGTGAGGAAAAGCGGAACTACCTTTACGCC
GCTGGCCTTCTTGCTGCAGCCAAAGTACGCCTTTCAAAAAATGACGTTACAGACGGTTTC
ATGTTGAAATTGTGGAAAGAACTTCTGGCAGACAGCGGGGCAAAAAATACCGAGGTTGAT
TTTTTCACAGTTGTAGTTGAGTTAAAGGAAAAGGTTTCGAAAATGCGAAAACTGGTTGAA
AAGCAAATTGCAGATATTCCCAAAGTTACAGAGAAAGGAAATAAGTTTTTGCAAGAACAA
AAAAAGATTGATGCTACAAAAAAAGTATTTATATACTGTAATGAAAACTACATAGATATT
ATGCGGTACGTATCTGATAAGATCTGTCAAGTTCTGTTCGATTCCGAGTTGCCCTGTGAG
TTTGCTCACTTGGTTTTCGGGTCAGTGGCTCGTATGGAAGGCAGTCCGTTTTCTGATTTC
GAAAACGCCATTATTATCTCCCAACGCACTGACGAGATCTTAGAAAGGTTTCGATTCTAC
ATCGTTTTGTTTCAATTCGTGATTATCAACTTAGGAGAAACACCCGTACGCTTGCTGGGA
ATTCCTTTGCTTAATGATTTCTACAGTGATCGCAAATCCAAGGACTGGTTCTACGACAAA
TTTACTAGTCTCGGCGTCCGGTTTGACAGCAACATGCCCGCAGCTTCGGTACATCCCCTC
TCTCGAGACCCGACCACCGACAAACCATTTAAAGTTGAGCTGATAGGAACTGTGAACGAA
ATCGCGCGTTTTTTAGAACACGACGAAGCTCTGCGCAATGGATATCACTTGGCCGATGTG
CTGAGTCGATCGCGCTTGGTGTCGGGAAATTTCAAACTGCATGAGGAATACAGAACGCAG
GTGGATAACAAACTTCGCATGAGCAAAGATTGGATTCGGGAACGGATAAAGAACTGCATG
GAAACGCTTGATGGCGCCGATGAGCTGTGTACGCCTTTCAGCAAGCGAAACATAAAGCTC
CTTATTTACAGAGGCATATCGGTTACCATCAGCCATTTGGGCAACTTGTTCGGTGTTCGT
AGCTCGTCTTGTTTTGACATTGTGGACGAGCTGGTTGAAAGTGGTCAGTTGCCAGCAGAA
GCGGGTCACAATCTCAAATACGCAGTCGCTTTAGCTGGAGAAATCCGACTTAAGATTTAC
ATGGCAGCCGGTGAGCAAGTCCCAGAGACAGACTTGGTTACGAAGGATGACGGAAAAGAA
ATGTCAGATATTATCAGCGCTGTCGGCAACGAGAGCATTTGTGATTATTTTTACATTGCG
CAGACATTGTGGCGCGATTTACATCCATTTGTAATGCAAGAATCTACAAGTATATCCTTC
TCATCAGAGCCGAAAGTCGACCCTGCCATGCGCTTTGCAATTCAAACCACGCTGCTCGGC
GTTGACACAACGCTTTTCGCGGAACAAAAAGATGCTTACAGGGACTACAAGAGAGCTATG
GAAAACCTACAAACATTTCTTAAAGCATCGTTAAAGGATGTCAGGTTGATTAACCTGTTA
CCGTCTGTTGTCTACACTCTTCATTGTGTGGCGGATTTCGTGTCGTCCTTTAACCGAACA
ATGGCATCGTATTTGGCAAATCCGGATACTAGCAACACGGAGCAGTTGTTGATTGAACTT
GACGACATTTCATCGGCGATGGATGGGTTTATCATGACATTGCCAGAGAAAGAAATCCCC
ATCTTCCATGAAAAGATCAATAGGGTGATGAAGTTCTTTTTCGACATCAATAATTGGTCG
TTTGTTATGCCTGCCTACTGCAAAGTTGTCAGAAGGGATTTAAAAATCATCACCGCCGAA
GTTAAATCCACGCGCGGTGAGCTGCTTACCCGAAACGGCGAGTATGCACTTGCCACGGAG
GATTTGTACACCGCTCATCGGATTTTAACTGACAACTCTCGCGAGAAAGATTGGTTTGAA
TTGAAAGTGGCGGCAAATATGCACAACATCGGTAAAACACTTTGTTCCTGTGAAAAATTC
TCCGAGGCACTAACATGGTTTCGTGAAGAGCTTGACCACAGACTTATTAAAGTACCGAAA
AAAACTGGCAAAGTGCATTTGGGCCCGAACTATCACTTCCAAGCAAAATGTCTTCGTGCC
ATCGGAACAGATAAAGCTTTGGCGGAAGCTGACATTTACATTGAAAGCGAAATTGAGTTG
TTTTTGTGA

InterProScan

Pfam
GlnD_Uridyltrans_N (IPR005105) - T[167-217] 8.1E-5
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[530-733] 6.72E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value