- Molecular Tool 'Hr-beta-catenin MO (Kumano 2006)' >
- EST 'FF792171.1' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S4116.g18227.01.t
Possible name(s)
TTC28
Gene model
Location
S4116 [2,951 / 5,889]
Amino acid sequence
Length: 790
>Phmamm.CG.MTP2014.S4116.g18227.01.p
MSAVDLEQFRREHWLSACEYFLGATLRKYCDHRGKEKNADVTGRIIHEIGRVYRRRTPDK
MSLIKSAVLFNAALQRKPGNSAEICEDLIELCMHVLKLAKSVDIKADMVNQAKFTKSKIN
ALRQLVKDHFKDSTPQTSASNTPEKLKSIERIENLQLEVTKGYSDAMKCILTFCVNAVGP
LPCAYALVGMGSLAKQEITPYSDFENLIVLQEGVQNRSNYEEILEYFRWVAVLFQIILVN
MGETILPFMDIFALRGWLYDAFTKCGVSPDGFAPQASKNPLGRQQATPSKPWXGRQQATP
SKPWTTELIKPVGEMLKYTKPIHDLKNGYHLADMLGKTCFVAGDEKVYEEFAEGVRASSG
SREEKFFEEVRADLKNFSIMSRLPYEQNSPLGRYYKIQAPSSFKITRKLIACGAIEKEFG
DDVLYSLGVACEVRQKVYSRSGAQEDRLQNKKRENESTIVNLLGKETAIFYFETAWKLQL
FVAKTVGGENPLERDEEDPVMTRMWIYYSLSLWSRTLEACRQLKLLDVPINDIEPKHALL
IGLCYVKLEQYKDALKYLQAVEIKLQDSDSLDLLHPFVDDKQENHYEIAKRLHFYGHVCR
GRQEMQLALMFYLRELEIRKRITAEPLKDKKVAKCYLYVGECYLDLKDYEKADEYFKRVE
TIYALNIFTPGRGMVLELNRAQLALFRQQYDRAMVHYSNQLELELGNEKKNLLRIGSCYS
GIGTTNLYKGNYDKAVECFEIAICVFALSKVEVVRDQSIVSCFKSIGEVRRQKREAEAKE
ELPHTSSQQP
Nucleotide sequence
Length: 2,373
>Phmamm.CG.MTP2014.S4116.g18227.01.t
ATGAGCGCGGTTGACCTTGAGCAATTTCGTCGCGAACACTGGTTGTCTGCTTGTGAATAT
TTTCTCGGTGCCACTTTGAGGAAATATTGCGACCACCGTGGCAAAGAAAAAAATGCTGAC
GTCACAGGCAGGATTATTCATGAAATTGGGCGAGTTTACAGACGAAGAACTCCTGACAAA
ATGTCGCTCATTAAATCTGCGGTTCTGTTCAATGCCGCTTTACAACGTAAACCTGGCAAT
TCAGCTGAAATATGTGAAGACTTAATAGAACTTTGTATGCATGTTCTTAAGCTTGCTAAA
TCCGTCGACATAAAAGCTGACATGGTAAATCAGGCAAAATTTACAAAATCTAAGATCAAT
GCGCTAAGACAACTTGTTAAAGACCATTTTAAGGATTCTACACCACAAACGTCTGCGTCT
AATACCCCTGAAAAACTTAAAAGTATTGAAAGAATCGAAAACTTACAGTTGGAAGTGACA
AAAGGATATAGTGACGCAATGAAATGTATTTTGACGTTTTGTGTCAATGCTGTAGGGCCG
TTACCCTGCGCTTACGCTTTGGTAGGTATGGGTTCGCTTGCAAAGCAAGAAATTACTCCT
TATTCTGACTTCGAAAACCTCATAGTCTTACAGGAGGGCGTTCAAAATCGGAGCAACTAC
GAAGAGATACTAGAATATTTCCGATGGGTGGCGGTGTTGTTTCAAATAATTCTCGTAAAT
ATGGGAGAAACCATTCTCCCTTTTATGGACATTTTTGCGCTGCGCGGTTGGCTGTACGAT
GCTTTTACCAAATGTGGTGTATCGCCTGATGGCTTCGCCCCCCAGGCAAGCAAAAATCCG
CTCGGAAGGCAGCAGGCTACCCCGTCGAAGCCATGGNTCGGAAGGCAGCAGGCTACCCCG
TCGAAGCCATGGACAACAGAGCTGATCAAACCAGTCGGGGAAATGCTGAAATACACCAAA
CCCATTCATGACCTTAAGAACGGCTACCACTTAGCTGACATGCTCGGCAAAACCTGTTTC
GTAGCAGGAGACGAGAAGGTGTATGAAGAGTTTGCTGAGGGTGTGCGTGCAAGTTCAGGA
TCTAGAGAAGAGAAGTTTTTTGAAGAGGTTCGCGCCGATTTGAAGAATTTCTCAATCATG
TCGCGACTTCCATACGAGCAAAATTCACCTCTTGGTCGTTATTACAAAATCCAAGCGCCA
TCATCGTTCAAAATCACTCGTAAACTGATCGCATGCGGCGCTATTGAGAAGGAATTCGGT
GATGACGTGTTATACTCGCTTGGTGTCGCCTGTGAGGTTCGTCAAAAAGTGTACAGCCGC
TCAGGGGCGCAAGAGGACCGCTTGCAAAACAAGAAACGCGAAAATGAGTCGACCATTGTG
AATCTCCTGGGCAAAGAAACCGCTATCTTCTATTTTGAGACCGCTTGGAAACTGCAGCTC
TTTGTGGCTAAAACCGTTGGTGGAGAGAATCCGTTGGAACGAGACGAGGAAGACCCAGTT
ATGACAAGAATGTGGATATATTACTCGCTGAGTCTTTGGAGTAGAACTCTTGAAGCTTGT
CGCCAGCTGAAATTACTCGACGTCCCGATTAATGACATTGAGCCAAAGCATGCCCTGCTT
ATTGGATTATGTTACGTAAAGCTTGAGCAGTACAAGGATGCATTAAAGTATCTACAAGCT
GTCGAAATCAAGTTACAAGACAGTGACAGCTTGGACTTGCTCCACCCGTTCGTGGATGAT
AAGCAGGAAAATCATTACGAGATTGCCAAGCGCTTACATTTCTATGGTCACGTTTGCCGC
GGACGCCAAGAGATGCAACTGGCCCTGATGTTCTACTTGAGGGAGCTAGAGATCAGAAAA
AGGATTACCGCGGAACCGCTAAAAGATAAGAAAGTGGCGAAATGTTATCTGTACGTTGGG
GAGTGCTACTTAGACCTCAAAGACTATGAAAAAGCTGACGAGTACTTCAAACGGGTTGAG
ACAATTTACGCCCTAAATATTTTTACCCCCGGTCGTGGGATGGTCTTGGAGCTCAACCGA
GCTCAATTGGCCCTTTTTCGACAACAGTACGACCGCGCGATGGTGCATTATAGCAACCAG
CTTGAGCTTGAACTAGGGAATGAAAAGAAGAATTTACTGCGCATTGGTTCTTGCTATAGC
GGCATCGGCACTACGAATCTGTACAAAGGGAATTACGATAAAGCTGTTGAATGTTTCGAA
ATTGCGATTTGTGTATTCGCCTTGTCCAAAGTAGAGGTTGTACGTGATCAGAGCATTGTG
TCCTGCTTCAAAAGTATAGGTGAAGTTAGGAGACAGAAGAGAGAGGCTGAAGCCAAAGAA
GAATTGCCTCACACATCATCGCAGCAGCCCTAA
| Pfam |
GlnD_Uridyltrans_N (IPR005105) - T[152-239] 9.3E-6 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[465-668] 1.3E-14 - T[669-782] 5.3E-7 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[535-567] 5.31 - T[633-666] 9.293 - T[716-749] 6.667 |
| SMART |
TPR_repeat (IPR019734) - T[535-568] 22.0 - T[633-666] 0.16 - T[674-707] 110.0 - T[716-749] 19.0 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[540-743] 3.69E-14 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[633-749] 9.328 |
| Pfam |
TPR_repeat (IPR019734) - T[636-661] 0.014 |
| Protein Name | Identity | Bit Score | e-value |
|---|