- Transcript 'Phfumi.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S4124.g18236.01.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S4124 [786 / 8,654]
Amino acid sequence
Length: 414
>Phmamm.CG.MTP2014.S4124.g18236.01.p
MYLDLPAVTSNVISPFQKTIHVCVWFDSKRAVIGAFGNGEEIPSQGYPGYVVNGGGSLIL
GQDQDADEVDGMSVETATAIAEFDFLNPDAEEPDDTKATDWTIDPNKLNAMKQQFLLEKK
QQKKKGMKRPAKKHLQDMLQTFQGAEMQKANDDIDIHIPEEENLPFTVGGGQTGDESIET
ALGLGALAGLTVANEADPLAYDMSATKETFRKTWSPKFTLRSHFDGIRAIRFLPTESAVL
TASEDNTMKLWNLNKPLPNKKSQALDVEPIYSFRGHVGAVLCLDVSADGVFCFSGGIDSS
VRCWALPNINIDAYDTIRPSTPTCVEFVQCDSNHAVVSHTDGKVVLYDLETGKTPVILSE
NDTGRVNAVATHPTMPITMTAHDDRHIKFFDNSSGKTAGRVTSSNVDYNGRRFT
Nucleotide sequence
Length: 1,245
>Phmamm.CG.MTP2014.S4124.g18236.01.t
ATGTATCTCGACTTACCGGCTGTCACTTCAAATGTCATCAGTCCCTTCCAAAAGACTATT
CATGTATGCGTCTGGTTCGATTCCAAACGAGCTGTGATTGGAGCTTTTGGCAATGGTGAA
GAAATTCCCTCACAAGGTTATCCTGGATATGTTGTCAATGGAGGAGGAAGCTTAATACTT
GGACAAGATCAGGACGCGGATGAAGTGGATGGAATGAGTGTTGAAACTGCTACAGCCATC
GCAGAGTTTGATTTCTTGAACCCAGATGCTGAAGAACCAGACGATACTAAAGCCACAGAT
TGGACGATTGACCCAAACAAACTGAACGCAATGAAACAACAATTCCTACTTGAGAAAAAG
CAACAGAAAAAGAAAGGAATGAAAAGACCAGCAAAGAAACATTTGCAAGACATGCTTCAG
ACATTTCAAGGAGCCGAGATGCAAAAAGCAAACGACGACATTGATATCCATATACCCGAG
GAAGAGAACCTCCCATTCACCGTCGGAGGGGGTCAAACCGGCGACGAATCAATCGAAACT
GCACTTGGACTTGGAGCTTTAGCCGGACTCACTGTGGCCAACGAAGCGGATCCACTCGCT
TACGACATGTCAGCCACTAAGGAGACTTTCCGAAAAACCTGGAGCCCGAAATTCACGCTC
CGGAGCCACTTTGACGGGATCCGGGCGATCCGGTTCCTTCCCACCGAGTCAGCGGTTCTA
ACTGCGTCCGAAGATAACACGATGAAATTGTGGAATTTAAACAAACCTCTTCCCAATAAG
AAGAGTCAAGCTTTGGACGTTGAGCCGATCTACAGTTTCCGTGGACACGTAGGAGCAGTT
TTATGTCTGGATGTGAGCGCTGATGGAGTTTTCTGCTTCAGTGGAGGAATCGACTCATCT
GTGAGATGTTGGGCTCTTCCTAATATCAACATTGATGCGTACGACACCATACGACCTTCA
ACGCCCACTTGTGTTGAGTTTGTACAATGTGATTCCAACCACGCGGTGGTGTCCCATACC
GACGGAAAAGTTGTCTTGTATGATCTCGAAACAGGGAAAACACCTGTTATTCTCTCTGAA
AACGACACAGGTCGAGTAAATGCAGTCGCAACTCACCCAACCATGCCTATCACCATGACA
GCACACGACGATCGTCACATCAAGTTCTTTGACAATTCCTCAGGTAAAACTGCTGGTCGG
GTTACCTCGTCTAATGTTGATTACAACGGTCGTAGGTTCACTTAG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[201-412] 1.8E-31 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[207-403] 4.0E-32 |
| SMART |
WD40_repeat (IPR001680) - T[213-252] 2.9E-6 - T[266-305] 1.1E-6 - T[310-348] 56.0 - T[352-391] 2.0 |
| Pfam |
WD40_repeat (IPR001680) - T[215-252] 0.0022 - T[268-304] 2.8E-5 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[220-400] 20.145 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[220-254] 13.349 - T[273-304] 10.208 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[239-253] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 36.425 % | 254 | 3.12E-77 |
| STRN_HUMAN | 35.189 % | 254 | 1.92E-77 |
| STRN4_HUMAN | 37.621 % | 198 | 8.45E-57 |