- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Moocci.CG.ELv1_2.S37...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S418.g08491.01.t
Possible name(s)
TUBA1B; TUBA3C; TUBA3D
Gene model
Location
S418 [23,694 / 25,491]
Amino acid sequence
Length: 416
>Phmamm.CG.MTP2014.S418.g08491.01.p
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLITG
KEDAANNYARGHYTVGKEHVDSVLDRIRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLGIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAI
KTKRTIQFVDWCPTGFKVGLNFQPPTAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVDNEAEEDDDEY
Nucleotide sequence
Length: 1,251
>Phmamm.CG.MTP2014.S418.g08491.01.t
ATGCCGAGCGATAAAACTATCGGGGGTGGCGACGATTCCTTCAACACTTTCTTCAGCGAG
ACTGGAGCTGGAAAACATGTTCCAAGAGCTGTTTTCGTCGACTTGGAGCCAACCGTGATT
GATGAAATCCGCACCGGAACATATCGCCAGCTCTTCCATCCTGAACAGCTGATCACAGGA
AAGGAAGATGCTGCCAACAACTACGCCCGTGGCCATTACACTGTTGGCAAGGAGCATGTT
GACTCTGTGCTTGATCGCATCCGAAAGCTTTCTGATCAGTGCACTGGACTCCAAGGCTTC
CTCATCTTCCACTCGTTTGGAGGAGGAACCGGATCCGGATTCGCTTCCCTCCTCATGGAG
AGATTGTCAGTGGACTACGGAAAGAAATCCAAATTGGAATTCGCAATCTACCCCGCCCCA
CAGATTTCAACGGCAGTGGTTGAGCCTTACAACTCGATCCTGACAACTCACACGACCTTG
GAGCACTCCGACTGTGCTTTCATGGTCGACAACGAAGCTATCTACGACATTTGCCGCCGA
AACCTTGGCATTGAGCGACCGACCTACACCAACTTGAACCGGTTAATTAGTCAAATCGTC
TCATCCATCACCGCTTCGTTGAGATTCGACGGAGCTCTCAACGTCGATTTGACCGAGTTC
CAAACCAACTTGGTGCCATATCCACGTATCCACTTCCCATTGGTCACTTACGCTCCAGTG
ATTTCAGCTGAGAAAGCTTACCATGAGCAGCTTTCGGTGGCTGAGATCACCAACGCTTGC
TTCGAGCCAGCCAATCAGATGGTGAAGTGCGACCCACGTCATGGCAAATATATGGCTTGC
TGCATGTTGTACCGTGGTGACGTTGTCCCCAAAGACGTGAACGCAGCCATTGCAGCCATC
AAGACCAAGCGCACAATCCAGTTTGTGGATTGGTGCCCGACTGGCTTCAAAGTTGGCCTC
AATTTTCAGCCACCAACTGCTGTGCCCGGTGGAGATTTGGCCAAAGTGCAACGAGCTGTT
TGCATGTTGAGCAACACAACTGCTATTGCTGAGGCTTGGGCTCGTTTGGATCACAAGTTC
GACTTGATGTACGCCAAGCGCGCGTTCGTCCACTGGTATGTGGGAGAGGGAATGGAAGAA
GGAGAGTTCTCCGAAGCCCGCGAAGATTTGGCGGCTCTCGAGAAGGATTACGAGGAAGTT
GGAGTTGATTCAGTTGACAACGAAGCTGAGGAAGACGATGACGAATATTAG
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-233] 1.8E-109 |
| PANTHER |
Tubulin (IPR000217) - T[1-412] 8.0E-287 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[4-209] 2.49E-83 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[10-23] 6.2E-108 - T[53-66] 6.2E-108 - T[85-93] 6.2E-108 - T[113-125] 6.2E-108 - T[126-137] 6.2E-108 - T[179-191] 6.2E-108 - T[239-254] 6.2E-108 - T[286-307] 6.2E-108 - T[312-325] 6.2E-108 - T[325-344] 6.2E-108 - T[350-366] 6.2E-108 - T[387-403] 6.2E-108 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[12-178] 2.1E-54 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[14-211] 2.7E-83 |
| PRINTS |
Tubulin (IPR000217) - T[18-37] 4.9E-79 - T[60-71] 4.9E-79 - T[73-97] 4.9E-79 - T[99-117] 4.9E-79 - T[118-139] 4.9E-79 - T[143-156] 4.9E-79 - T[157-177] 4.9E-79 - T[345-373] 4.9E-79 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[107-113] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[211-402] 6.41E-86 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[213-358] 4.5E-58 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[228-357] 5.0E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[234-348] 1.7E-65 |
| Gene3D |
Tubulin_C (IPR023123) - T[349-415] 3.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 96.296 % | 796 | 0 |
| TBA3D_HUMAN | 96.296 % | 796 | 0 |
| TBA1C_HUMAN | 93.462 % | 794 | 0 |