- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'Moocci.CG.ELv1_2.S39...' >
- Clone 'cima003g22' >
- Clone 'cima824328' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S418.g08492.01.t
Possible name(s)
TUBA1C; TUBA3C; TUBA3D
Gene model
Location
S418 [30,198 / 32,203]
Amino acid sequence
Length: 483
>Phmamm.CG.MTP2014.S418.g08492.01.p
MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVI
DEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEHVDLVLDRIRKLADQCTGLQGF
LIFHSFGGGTGSGFGSLLMERLSVDYGKKSKLEFAIYPAPQCTGLQGFLIFHSFGGGTGS
GFGSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNE
AIYDICRRNLDIERPTYTNLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHF
PLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKD
VNAAIAVIKTKRTIQFVDWCPTGFKIGLNFQPPTPVPGGDLAKVQRAVCMLSNTTAIAEA
WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEDEAEGD
DEY
Nucleotide sequence
Length: 1,452
>Phmamm.CG.MTP2014.S418.g08492.01.t
ATGGGCAATGCTTGCTGGGAGTTGTATTGCTTGGAACACGGCATCCAGCCGGATGGACAA
ATGCCGAGCGATAAAACCATCGGCGGTGGCGACGATTCCTTCAACACTTTCTTTAGTGAA
ACTGGAGCTGGAAAACATGTCCCAAGAGCTGTTTTCGTCGACTTGGAGCCAACTGTCATC
GATGAAATCCGCACCGGAACATACCGCCAGCTCTTCCACCCTGAACAGCTGATCACAGGA
AAGGAAGATGCTGCCAACAACTACGCCCGTGGCCACTACACCGTTGGCAAAGAGCATGTG
GACCTGGTGCTTGATCGCATCCGAAAACTTGCTGATCAGTGCACTGGACTTCAAGGGTTC
CTCATCTTCCACTCGTTCGGAGGAGGAACCGGATCCGGATTCGGTTCTCTTCTCATGGAG
AGATTGTCGGTGGACTATGGAAAGAAATCCAAATTGGAATTCGCAATCTACCCCGCTCCA
CAGTGCACTGGACTTCAAGGGTTCCTCATCTTCCACTCGTTCGGAGGAGGAACCGGATCC
GGATTCGGTTCTCTTCTCATGGAGAGATTGTCGGTGGACTATGGAAAGAAATCCAAATTG
GAATTCGCAATCTACCCCGCTCCACAGATTTCAACTGCAGTTGTTGAGCCTTACAACTCG
ATCCTGACAACTCACACAACCTTGGAGCACTCCGACTGTGCTTTCATGGTCGACAACGAA
GCTATCTACGACATTTGCCGCCGAAACCTCGACATCGAGCGACCGACCTACACCAATTTG
AACCGGTTAATTAGTCAAGTCGTCTCATCGATTACCGCTTCGTTGAGGTTCGACGGAGCT
CTCAACGTCGATTTGACCGAGTTCCAAACCAACTTGGTGCCATATCCACGTATCCACTTC
CCATTGGTCACTTACGCTCCAGTGATTTCAGCTGAGAAAGCTTACCATGAGCAGCTTTCG
GTGGCTGAGATCACCAACGCTTGCTTCGAGCCAGCCAATCAGATGGTGAAGTGCGACCCA
CGTCATGGCAAATATATGGCTTGCTGCATGTTGTACCGTGGTGACGTTGTCCCCAAAGAC
GTGAACGCAGCCATTGCAGTAATTAAGACCAAGCGCACAATTCAGTTTGTGGACTGGTGT
CCAACCGGCTTCAAAATTGGCTTGAATTTTCAACCACCAACTCCTGTTCCCGGTGGAGAT
TTGGCCAAAGTACAGCGAGCTGTTTGCATGTTGAGCAACACAACTGCTATCGCTGAGGCT
TGGGCTCGTTTGGATCACAAGTTCGACTTGATGTACGCCAAGCGCGCGTTCGTCCACTGG
TATGTGGGAGAGGGAATGGAAGAAGGAGAGTTCTCCGAAGCCCGCGAAGATTTGGCGGCT
CTAGAGAAGGATTACGAGGAAGTTGGAGTTGATTCGGTTGAAGATGAAGCTGAGGGCGAT
GACGAATATTAG
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-160] 2.7E-74 - T[161-301] 4.3E-65 |
| PANTHER |
Tubulin (IPR000217) - T[1-161] 0.0 - T[159-480] 0.0 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[1-159] 1.9E-46 - T[161-246] 4.6E-26 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[2-160] 1.7E-63 - T[161-277] 1.96E-46 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[3-18] 8.7E-73 - T[307-322] 8.7E-73 - T[354-375] 8.7E-73 - T[380-393] 8.7E-73 - T[393-412] 8.7E-73 - T[418-434] 8.7E-73 - T[455-471] 8.7E-73 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[34-279] 1.3E-75 |
| PRINTS |
Tubulin (IPR000217) - T[38-57] 2.5E-47 - T[80-91] 2.5E-47 - T[93-117] 2.5E-47 - T[119-137] 2.5E-47 - T[138-159] 2.5E-47 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[127-133] . - T[175-181] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[279-470] 8.24E-85 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[281-426] 4.5E-57 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[296-425] 5.6E-50 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[302-416] 2.1E-64 |
| Gene3D |
Tubulin_C (IPR023123) - T[417-470] 3.8E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 86.469 % | 820 | 0 |
| TBA3D_HUMAN | 86.469 % | 820 | 0 |
| TBA1C_HUMAN | 84.407 % | 820 | 0 |