- Transcript 'KH2012:KH.L22.74.v1....' >
- Transcript 'KH2012:KH.C14.422.v1...' >
- Transcript 'KH2012:KH.C1.372.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S421.g08541.01.t
Possible name(s)
LRGUK; LRRC23; LRRC49
Gene model
Location
S421 [104,974 / 107,829]
Amino acid sequence
Length: 328
>Phmamm.CG.MTP2014.S421.g08541.01.p
MSEGSDFDEEEMAAEEEEKQEGGEGEAEEEEKLPENSLTQDMIPECLSLLCKIGNGLAHA
YVRLDAHERELTDIELLKNFIHVRYVDVSGNLLKDLSPLNNLTHLLSLQANKNNLATAKL
DSLPYLQIADFSGNKITTTEGIEHPMLTKLSLNSNLITEISSLSPKTLSNLHTLELRGNK
LESTRGLYLPNLKNLYLAGNLLKQVEDLDKLESLTTLHLRDNQIDKLDGFPPSLKKLQYI
NFRGNNITDLKEITKLVNLPFLRALVMNDNPCLEEDGYRIEILIILRRLERLDKEEYSEE
ERAEAEDIYEQRRQEELMKGEEGENEDD
Nucleotide sequence
Length: 987
>Phmamm.CG.MTP2014.S421.g08541.01.t
ATGTCGGAAGGTTCGGATTTTGACGAAGAGGAAATGGCTGCAGAAGAGGAAGAAAAGCAA
GAAGGAGGAGAGGGTGAAGCCGAGGAAGAAGAGAAACTTCCTGAAAATTCTCTTACGCAA
GACATGATTCCTGAGTGTCTATCATTGCTGTGTAAAATTGGAAATGGACTGGCACATGCC
TATGTCAGACTGGATGCCCATGAACGGGAACTTACAGATATTGAGTTGTTAAAGAACTTC
ATTCATGTCCGCTATGTTGATGTCTCTGGAAATCTACTTAAAGATCTATCTCCTTTGAAC
AATCTAACTCATCTTCTGTCTTTACAAGCTAACAAAAACAACCTGGCAACAGCGAAACTA
GATTCCTTGCCATATTTACAAATTGCAGATTTTTCTGGAAACAAAATCACCACCACTGAA
GGAATCGAGCATCCAATGTTGACGAAACTTAGTTTAAACTCCAACCTGATCACAGAGATA
AGCTCACTGAGTCCAAAAACCCTCAGCAACCTTCACACTTTAGAGTTACGAGGAAACAAA
CTTGAATCAACCAGAGGACTTTATCTGCCAAATCTAAAGAACCTGTATTTGGCAGGGAAC
CTCTTGAAACAAGTAGAAGATTTGGACAAACTTGAAAGCCTTACCACTCTTCATTTGCGA
GACAATCAAATTGATAAGTTGGATGGTTTTCCACCGTCATTGAAGAAACTACAGTACATC
AATTTTAGAGGAAACAACATCACAGATTTGAAAGAAATAACAAAACTAGTAAATCTCCCA
TTTCTCCGTGCCCTTGTAATGAATGACAATCCTTGCTTGGAAGAGGATGGATATCGTATT
GAGATTCTCATTATTCTGAGGCGGTTAGAACGACTTGACAAAGAAGAATACAGTGAAGAG
GAGAGAGCAGAGGCAGAGGACATATATGAGCAACGGAGGCAGGAGGAGCTGATGAAAGGC
GAAGAGGGAGAAAATGAGGATGACTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[31-187] 5.0E-19 - T[188-310] 7.7E-27 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[82-103] 6.942 - T[125-145] 5.078 - T[146-167] 7.75 - T[170-190] 6.133 - T[191-212] 8.474 - T[213-234] 7.689 - T[236-257] 7.65 |
| Pfam |
Leu-rich_rpt_4 (IPR025875) - T[145-184] 2.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRGUK_HUMAN | 33.818 % | 122 | 1.18E-30 |
| LRC23_HUMAN | 60.9 % | 313 | 4.37E-106 |