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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.37.v1.A...' > 
  2. Clone 'cien223504' > 
  3. Transcript 'Phmamm.CG.MTP2014.S4...'

Transcript Model

Transcript Id

Phmamm.CG.MTP2014.S421.g08541.02.t

Possible name(s)

LRGUK; LRRC23; LRRC49

Gene model

Phmamm.CG.MTP2014.S421.g08541

Location

S421 [105,984 / 108,031]

Sequences

Amino acid sequence

Length: 259

>Phmamm.CG.MTP2014.S421.g08541.02.p
ELTDIELLKNFIHVRYVDVSGNLLKDLSPLNNLTHLLSLQANKNNLATAKLDSLPYLQIA
DFSGNKITTTEGIEHPMLTKLSLNSNLITEISSLSPKTLSNLHTLELRGNKLESTRGLYL
PNLKNLYLAGNLLKQVEDLDKLESLTTLHLRDNQIDKLDGFPPSLKKLQYINFRGNNITD
LKEITKLVNLPFLRALVMNDNPCLEEDGYRIEILIILRRLERLDKEEYSEEERAEAEDIY
EQRRQEELMKGEEGENEDD

Nucleotide sequence

Length: 984

>Phmamm.CG.MTP2014.S421.g08541.02.t
GGGAACTTACAGATATTGAGTTGTTAAAGAACTTCATTCATGTCCGCTATGTTGATGTCT
CTGGAAATCTACTTAAAGATCTATCTCCTTTGAACAATCTAACTCATCTTCTGTCTTTAC
AAGCTAACAAAAACAACCTGGCAACAGCGAAACTAGATTCCTTGCCATATTTACAAATTG
CAGATTTTTCTGGAAACAAAATCACCACCACTGAAGGAATCGAGCATCCAATGTTGACGA
AACTTAGTTTAAACTCCAACCTGATCACAGAGATAAGCTCACTGAGTCCAAAAACCCTCA
GCAACCTTCACACTTTAGAGTTACGAGGAAACAAACTTGAATCAACCAGAGGACTTTATC
TGCCAAATCTAAAGAACCTGTATTTGGCAGGGAACCTCTTGAAACAAGTAGAAGATTTGG
ACAAACTTGAAAGCCTTACCACTCTTCATTTGCGAGACAATCAAATTGATAAGTTGGATG
GTTTTCCACCGTCATTGAAGAAACTACAGTACATCAATTTTAGAGGAAACAACATCACAG
ATTTGAAAGAAATAACAAAACTAGTAAATCTCCCATTTCTCCGTGCCCTTGTAATGAATG
ACAATCCTTGCTTGGAAGAGGATGGATATCGTATTGAGATTCTCATTATTCTGAGGCGGT
TAGAACGACTTGACAAAGAAGAATACAGTGAAGAGGAGAGAGCAGAGGCAGAGGACATAT
ATGAGCAACGGAGGCAGGAGGAGCTGATGAAAGGCGAAGAGGGAGAAAATGAGGATGACT
AACCACTGTGCTGCTTCAAAATCCACTTTTAATCAGATTTTGCATTCTACACCAAATTTT
AACGTTTAACACAGAAATATGAGAAGATGGCTTTCGGTACTTTGATATATGCACTGCTGG
TTTCAGAGGTTACTTTTATGTATGATTTGCATCTGTAGACTATGAAGTTTCATATTTTTA
GATTTATTTTATTGAATGGTTGCT

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[1-118] 2.1E-17 - T[119-241] 4.0E-27
ProSiteProfiles
Leu-rich_rpt (IPR001611) - T[13-34] 6.942 - T[56-76] 5.078 - T[77-98] 7.75 - T[101-121] 6.133 - T[122-143] 8.474 - T[144-165] 7.689 - T[167-188] 7.65
Pfam
Leu-rich_rpt_4 (IPR025875) - T[76-115] 3.0E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LRGUK_HUMAN 35.537 % 112 2.84E-28
LRC23_HUMAN 60.082 % 259 7.13E-86