- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C11.371.v1...' >
- Region 'REG00001228' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Phmamm.CG.MTP2014.S4...'
Transcript Model
Transcript Id
Phmamm.CG.MTP2014.S422.g08557.02.t
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
S422 [86,328 / 92,892]
Amino acid sequence
Length: 564
>Phmamm.CG.MTP2014.S422.g08557.02.p
MDSEKSIEDMSQKEKEKFARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTI
LRMAVSHMKNLRGAMAGGMENNFKPSFLTDQELKHLVLEAADGFLFVTACDSSQVVYVSD
TVTAVLNQAHAEWNGHLLYDLIHPDDVGKVREQLCISESQNSGRVLDLKTGTVKKEGQQS
SVRMCMGSRRAFICRMRVGKHQMNMARPRYMRAQNTLGQPEDGKDSYVVMHVTGFIRAWP
PAGYGSEADAMEEVSLAAGNNSGNYCLVAVARLQITSHPGVGEISSSQEATEFVSRHGRD
GAFTFVDLRVTGVLGYQPQDLLTKMPSDFYHPEDIEHMKESFKQVLLLKGQVLTMSYRFR
AQSGEYAWLRTSSFSFQNPYNNEVEYVVCTNTLVKQPGSDQHQVEVPNAAVPAEIKSMPT
YAHTPTEQSPQVMQQYPMAQVAVKSPVTEMDYSPQQQFNSPTQAGWNHGAAVPATVSPYQ
PQPTVSERFAPNLGAQHNAGSVPYSSGSYQTTPPVMYPVSAAHHPIRDAYQQQEAMATMM
EPGAAAYTQADYNNLGMYSSYSES
Nucleotide sequence
Length: 1,695
>Phmamm.CG.MTP2014.S422.g08557.02.t
ATGGATTCAGAAAAAAGCATTGAAGACATGTCACAAAAAGAAAAAGAAAAATTTGCAAGG
GAAAACCACTCTGAGATTGAACGGAGGCGAAGAAATAAAATGACAGCTTACATCACGGAA
CTGTCTGATATGGTGCCTACATGCAGTGCACTTGCCAGAAAACCCGACAAGCTGACAATT
TTGCGCATGGCAGTTTCACACATGAAGAATTTGCGTGGCGCTATGGCAGGTGGAATGGAA
AATAACTTCAAGCCTTCTTTTCTCACAGACCAGGAACTCAAGCATCTGGTTCTTGAAGCT
GCTGATGGATTCCTATTTGTTACTGCTTGTGATTCCAGTCAAGTTGTCTATGTTTCAGAC
ACTGTGACTGCGGTGCTTAATCAGGCACATGCCGAATGGAATGGTCACCTTTTATATGAT
CTCATTCATCCCGATGATGTTGGAAAAGTCAGAGAGCAACTATGCATTTCTGAATCGCAA
AATTCAGGCCGGGTTTTGGATTTGAAGACAGGGACAGTGAAAAAAGAAGGTCAGCAAAGC
TCTGTGCGGATGTGCATGGGGTCAAGAAGAGCTTTTATATGCAGAATGAGAGTTGGCAAA
CATCAGATGAACATGGCACGACCAAGATATATGAGAGCACAAAATACCCTTGGACAACCA
GAAGATGGGAAGGACTCTTATGTGGTGATGCATGTAACTGGTTTTATACGTGCTTGGCCA
CCTGCAGGTTACGGTTCAGAAGCAGATGCAATGGAAGAAGTTTCACTTGCGGCAGGAAAT
AACTCTGGCAACTATTGCCTTGTTGCTGTAGCAAGACTTCAGATCACAAGCCACCCAGGT
GTTGGTGAGATCAGTTCATCCCAAGAAGCTACAGAGTTTGTTTCCAGACATGGCAGGGAT
GGAGCTTTTACATTTGTAGATCTTCGTGTCACTGGAGTACTTGGTTATCAGCCACAGGAT
CTTTTGACCAAAATGCCTTCTGATTTTTACCACCCAGAGGATATTGAACACATGAAAGAG
AGTTTTAAACAAGTATTGCTGCTTAAGGGACAGGTATTGACCATGTCCTACAGATTCCGT
GCCCAATCAGGGGAATATGCTTGGCTGAGAACTAGTTCATTTTCCTTTCAAAATCCTTAC
AACAATGAAGTAGAATATGTTGTGTGCACCAATACCCTAGTCAAGCAACCTGGTTCAGAC
CAACATCAAGTTGAGGTTCCAAATGCTGCTGTTCCTGCTGAGATCAAGTCTATGCCAACT
TATGCCCATACTCCCACTGAGCAATCACCCCAGGTCATGCAGCAATATCCAATGGCCCAA
GTTGCAGTAAAGAGCCCAGTTACTGAAATGGACTACTCTCCACAACAGCAGTTTAACTCA
CCGACTCAAGCTGGCTGGAACCATGGGGCAGCCGTTCCAGCGACAGTCAGCCCATATCAA
CCTCAACCAACAGTTTCTGAGCGATTTGCACCTAATTTAGGTGCACAACACAATGCTGGA
TCAGTTCCATACAGTTCCGGTTCATACCAGACCACTCCTCCAGTGATGTATCCTGTAAGT
GCTGCTCACCACCCTATTAGGGATGCTTACCAACAGCAGGAAGCCATGGCAACTATGATG
GAACCAGGAGCAGCTGCTTACACCCAAGCTGATTACAACAATCTTGGAATGTATTCTTCC
TACTCTGAATCTTGA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[7-74] 2.1E-21 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[18-71] 16.952 |
| Pfam |
bHLH_dom (IPR011598) - T[20-71] 2.2E-13 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[20-101] 4.19E-15 |
| CDD |
bHLH_dom (IPR011598) - T[20-72] 5.30593E-15 |
| SMART |
bHLH_dom (IPR011598) - T[24-77] 4.9E-13 |
| PRINTS |
Nuc_translocat (IPR001067) - T[33-48] 1.4E-77 - T[53-73] 1.4E-77 - T[83-106] 1.4E-77 - T[108-127] 1.4E-77 - T[140-158] 1.4E-77 - T[186-199] 1.4E-77 - T[227-246] 1.4E-77 - T[292-309] 1.4E-77 |
| ProSiteProfiles |
PAS (IPR000014) - T[90-163] 11.391 - T[300-349] 12.486 |
| SMART |
PAS (IPR000014) - T[92-159] 3.7E-5 - T[280-347] 3.6E-4 |
| Pfam |
PAS_fold (IPR013767) - T[96-197] 1.0E-7 |
| CDD |
PAS (IPR000014) - T[101-190] 4.0659E-7 - T[290-388] 3.98845E-14 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[102-229] 5.59E-10 - T[292-393] 1.1E-25 |
| TIGRFAM |
PAS (IPR000014) - T[297-388] 9.8E-8 |
| SMART |
PAC (IPR001610) - T[354-397] 1.7E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 60.354 % | 506 | 6.01E-172 |
| ARNT2_HUMAN | 59.259 % | 491 | 7.69E-167 |
| BMAL1_HUMAN | 41.687 % | 332 | 1.23E-106 |